Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4711 ATGGAAAGGTATAAAATTTTGAAAGAGCTTGGACATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATACGAGAACTTTTGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGCTTTTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGCCCTCCGTAAAATGAATCATCCAAATATCATAAAGTTGAGAGAAGTTGTTAAAGAAAATAATGAACTCTTTTTAATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAAGAGAAAGAAAAACCCTTTTCAGAGGAAGAGATACGATGCTTGATGAAGCAAGTGCTCCAAGGACTTAGTCACATGCACAAGAAAGGATTCTTTCACCGGGATTTAAAACCTGAAAATTTGCTGGTGTCAAATGATGTTCTTAAAATTGCTGATTTTGGACTCGCTAGAGAAGTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGGTGGTACAGAGCTCCTGAAGTTTTGTTGCAGTCCGCATGCTATACTCCTGCTGTTGACATGTGGGCTATTGGTGCTATATTAGCCGAGCTTTTTACTTTGACCCCCATATTTCCCGGTGAAAGTGAAATAGATCAACTGTACAAAATATACTGCATTCTTGGTATGCCAGATTCAACTTGTTTCACCATAGGTGCAAACAACTCTAGGCTATTGGACTTTGTACGCCATGAAGTTGTTCCACCTATTAAGCTTTCTGATATCATTCCAAATGCTAGCATGGAAGCTATTGATTTGATTACACAATTGTTATCATGGGACCCATCTAGAAGACCGGATGCGGATCAGTCACTGCAACATCCTTTTTTCCATGTGCATACAAGGGTTCCTCGTTCACTTGGTGATCCACTCGAGCTGAAGCTGAGTAACAAGAGGGCAAAGCCAAATCTTGAGTTGAAATTGTATGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACATTGGCTGTAAAGCCCAGCGTTTCAAACTTAGATGTGGTTCAAAATGCATCGCGTGGTATGGGAGAGAATATGCTATTTTGCTCGAATTTTAATGATCATCAAGATCAATCAGTTTTTTGGTCATTATTATCTCCTGATCAGAATGGAGTTCACAACTCAGCAGAGACTTCATTATCATTGTCATTTGGATCTGTTCAACACCAGCCAATTGGAATTCCACAGACAGCGGGGTTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACTACACCATTTTTGACACCGTCTTCTCCGTTCCAGCGCCGGCATTTCCTTTGA 1308 0.3922 MERYKILKELGHGSCGHVYKARDTRTFEIVAVKRLKRKFCFWEEYTNLREVKALRKMNHPNIIKLREVVKENNELFLIFEYMDCNLYQLIKEKEKPFSEEEIRCLMKQVLQGLSHMHKKGFFHRDLKPENLLVSNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSACYTPAVDMWAIGAILAELFTLTPIFPGESEIDQLYKIYCILGMPDSTCFTIGANNSRLLDFVRHEVVPPIKLSDIIPNASMEAIDLITQLLSWDPSRRPDADQSLQHPFFHVHTRVPRSLGDPLELKLSNKRAKPNLELKLYDFGPDPDDCFLGLTLAVKPSVSNLDVVQNASRGMGENMLFCSNFNDHQDQSVFWSLLSPDQNGVHNSAETSLSLSFGSVQHQPIGIPQTAGFSFQPLQPNILTTPFLTPSSPFQRRHFL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4711 435 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 319 - -
Psa4g4711 435 CDD STKc_MAK_like 4 284 - -
Psa4g4711 435 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Psa4g4711 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Psa4g4711 435 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 319 - -
Psa4g4711 435 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4711 435 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Psa4g4711 435 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4711 435 Gene3D Transferase(Phosphotransferase) domain 1 83 292 - -
Psa4g4711 435 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4711 Psa-Chr4 416442163 416452269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4711 1 310 Core Cell Cycle Gene Families AT1G66750 38.390 4.30e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Psa4g4711 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4711 K08829 K08830 gmx:100792842 778.089