Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4701 GACCTTCCTTCTTATTTTCAAATTTCTACATTCATATTAGCCTTATTGATTGTAAAACTTGTCTGTAGAACTATTAGATCACCTAATAGATCTAAAGAAACTAAGTTCAACATCAACCATAACAAAATACTCGAACCATGTTTTGCTTTACCTTTCATAGGCCACCTTCATCTTCTAAGCACTAAAGAACCATATTTTAGAACCTTTTCAACCATGGCTGAAAAATATGGTGCAATCTTCTCCCTTAGGATTGGTTGCCACAAAACCCTAGTGGTGAGTAGTAGAGAAATTGCCAAAGAATGTCTCACAAAAAATGACAAAGTTTTTGCTTCAAGACCTAATATAGCTGCAGGGAGATACATGGGTTACAATAATGCTATTTTAGCTCTTGCACCATATGGAGATTATTGGAGAAATATGAGAAAAATTGCTACTGTTGAGCTTTTATCAAGTCATAGACTTGAAAAGCTAAAACATGTTAGAGATTTAGAGATATATTCTCTAGTCAAAGATTTGTACACATTTGTAAAAAAATCAAATGGTTCATATGAAGTGCCTATTAGCAAGTTTTTAGATCATATGACATTTAATATAATTGTGAGGATGATAGCTGGGAAAAGATTTAGTGGTGAAACAATAAATCAAGAAGATAGTGAAGCGTGGAGATTAAGGAATGCAATTAAAGATGCTACATATCTAAGTGGTGTTTTTGTTGTGGCTGATGCTATTCCATTTCTTAGCTGGTTTGACCTTCAAGGGCATGTGAGTTTCATGAAGAGGACAGCTAAGGAAATGGATTTTATTCTTGATAAGTGGTTGCATGAACATTATAGAAAGAAAGATGAGGGACAAAATGGTAAATGTGAGGATGATTTTATGGATGTGTTGATATCAATGTTTGAAGAGGATGATGAAATTTGTGGCCACAAACGCGAGGTAGTTATCAAAGCAACATCGATGATTCTTATCCTTACAGCCTCAGGAAGCACATCAATAACACTAGTATGGGCTATTTCATTACATATAAACCATCCAAAGATCTTAGAAAAAGCCCAACAAGAATTAGACAAAAACATAGGAAAACACAAATGGGTCCAAGAATCTAACATCAAAGACCTCAAATATCTTCAAGCCATTATCAAAGAGACTCTTCGACTATATCCACCAGCACCTTTAACAGGAATAAGGGAAGCCACAGATGATTGCCATGTAGCAGGATACAAGGTCCCCAAAGGCACTCGTTTGGTTATTAATCTATGGAAATTGCAAAGGGACCCACTAATATGGTCCAAACCTAATGAATTTCAACCTGAGAGGTTTTTCAATAATCATGATCACATTGATTTTCAAAATCAGGATTTTGGGTACATACCATTTAGTTATGGAAGAAGATCTTGTGCTGGTTCAACATTTGGGACGCAAGTGTTGTATTTGACTTTGGCTAGGTTGATTCAAGGGTTTGATATATATACAAAGGAAGGTGATGAAGTTGATATGACTGAAGGGTTAGGATTGGCATTACCTAAGGAAAATCCACTTGAAGTTATGTTTCAACCACGTCTTCCATCAGAGCTTTATGAAAGCCTTTGA 1590 0.3547 DLPSYFQISTFILALLIVKLVCRTIRSPNRSKETKFNINHNKILEPCFALPFIGHLHLLSTKEPYFRTFSTMAEKYGAIFSLRIGCHKTLVVSSREIAKECLTKNDKVFASRPNIAAGRYMGYNNAILALAPYGDYWRNMRKIATVELLSSHRLEKLKHVRDLEIYSLVKDLYTFVKKSNGSYEVPISKFLDHMTFNIIVRMIAGKRFSGETINQEDSEAWRLRNAIKDATYLSGVFVVADAIPFLSWFDLQGHVSFMKRTAKEMDFILDKWLHEHYRKKDEGQNGKCEDDFMDVLISMFEEDDEICGHKREVVIKATSMILILTASGSTSITLVWAISLHINHPKILEKAQQELDKNIGKHKWVQESNIKDLKYLQAIIKETLRLYPPAPLTGIREATDDCHVAGYKVPKGTRLVINLWKLQRDPLIWSKPNEFQPERFFNNHDHIDFQNQDFGYIPFSYGRRSCAGSTFGTQVLYLTLARLIQGFDIYTKEGDEVDMTEGLGLALPKENPLEVMFQPRLPSELYESL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4701 529 Gene3D Cytochrome P450 39 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Psa4g4701 529 PANTHER CYTOCHROME P450 82C3-RELATED 12 527 - -
Psa4g4701 529 Pfam Cytochrome P450 49 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 SUPERFAMILY Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PANTHER CYTOCHROME P450 82G1 12 527 - -
Psa4g4701 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4701 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4701 Psa-Chr4 416252275 416254855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4701 46 526 Cytochrome P450 AT4G31970 47.951 6.20e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4701 K17961 - gmx:100787489 740.725