Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4689 ATGGCTTCCTCCACTCGTCAATTCTTCGCCATTTTTCTGTCTCTCAGCCTTGCTCTTCTCCTTTTCTTCACACCGGAGGCGCAAGGAAATCTTTGTCAAAGGCCAAGCGAAACATGGTCAGGACCTTGTTTAGATACTGCAAACTGTAAAGATCAGTGCATCAGCATTGAACATGCTACTTTTGGGGCTTGTCACCGTGATGGCCTTGGATTTGCTTGCTTTTGTTACTTCAACTGCTAA 240 0.4542 MASSTRQFFAIFLSLSLALLLFFTPEAQGNLCQRPSETWSGPCLDTANCKDQCISIEHATFGACHRDGLGFACFCYFNC* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4689 79 Pfam Gamma-thionin family 31 79 - -
Psa4g4689 79 Gene3D - 31 79 IPR036574 -
Psa4g4689 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
Psa4g4689 79 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 1 79 - -
Psa4g4689 79 SMART gth_4 31 79 IPR003614 GO:0006952
Psa4g4689 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4689 Psa-Chr4 415417285 415417978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4689 1 79 Plant Defensins Gene Families AT1G19610 45.122 2.19e-17 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4689 - - mtr:MTR_8g012775 103.99