Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4687 ATGTTTTTCGTACCTTTTGTAAGAGAAAATCATCTACACTTAGCAACCATGAATGCCGCTAATAGTAAATTCTTCACCATCTTCATGCTCATCTGCCTAGCCCTTCTTCTTTTTTCCACATCGGAGGTGGAAGCAAAAGTTTGCGAAAAGAGAAGTAAAACATGGTCAGGATTTTGTGGTAAAACAAGAAACTGTAAAAAACAGTGCATCAATGTGGAGAATGCAGTTTTCGGTGCTTGTCACCGTCAAGGTTTTTTTGGTTTTGCTTGTTTCTGCTATTTCAAATGCTGA 291 0.3814 MFFVPFVRENHLHLATMNAANSKFFTIFMLICLALLLFSTSEVEAKVCEKRSKTWSGFCGKTRNCKKQCINVENAVFGACHRQGFFGFACFCYFKC* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4687 96 SMART gth_4 47 96 IPR003614 GO:0006952
Psa4g4687 96 ProSitePatterns Gamma-thionins family signature. 46 69 IPR008176 GO:0006952
Psa4g4687 96 PANTHER DEFENSIN-LIKE PROTEIN 1 17 96 - -
Psa4g4687 96 Pfam Gamma-thionin family 46 96 - -
Psa4g4687 96 Gene3D - 47 96 IPR036574 -
Psa4g4687 96 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 17 96 - -
Psa4g4687 96 SUPERFAMILY Scorpion toxin-like 45 96 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4687 Psa-Chr4 415368711 415369586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4687 25 96 Plant Defensins Gene Families AT1G19610 53.333 2.33e-24 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4687 - - mtr:MTR_8g012775 125.946