Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4682 ATGGCTTTTCCAACTCATAACAAAGCTCACTTCTTGTTATTCATAACATTCCTCACATTTTGCACCTTTTTTTCATGCTATAGCTCAATCACTGATACCCTTACATCATCCAAATACCTTAAAGACAATGAAACAATAACCTCAGACAGCACAAACTTCATACTAGGATTTTTCAGTCCATTAAATTCAACAAACCGTTACCTAGGAATCTGGTACATTAATCAAACAAACACAATATGGATTGGTAACAGAGACCAACCTGTGACAGATTCAAACGGAATCGTCGAAATTCAAAAAGATGGTAATCTTGTGATACTAGACAAACCAAAGGGTATCATCATTTGGTCAACAAATATTTCATCATCAGCAAAAAGCATCAACTCAACAGCTCAACTTAATGATGCAGGAAACTTGATTCTAAGAGATTTGAGTTCTGGATTAACGATTTGGGACAGTTTCACTCACCCTGCAGATGCTGCTGTTCCATCCATGAGAATTGCGGCGAATAAAGTAACAGGTGAGAAGATATCTTTTGTTGCAAGAAAAAGCGAGAACGATCCTTCTTCGGGTAGTTTCTCGATTAGTCTTGAAAGATTGGATGCGCCAGAGGTTTTTATTTGGCATGATAAAAAGATTTATTGGAGAACCGGTCCTTGGAACGGAAGGATTTTTCTCGGATCGCCGAGAATGTCGACCGAGTATTTATTCGGTTGGCTGTTAAATCCCAACGATAACGGAACTGCTTATATAACTTACAATTTCGCGGATAAGAATATGTTCGGGATTCTTTCGTTGACACCACATGGAACACTTAAGCTGGTTGAGTATTCGGATAAAAAGGAAGTTCTTAATCTCGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCAAATGGGAATTGCGATAACTCAACAACGCCAATTTGTCATTGTTTTGAGGGGTTTGAGCCAAAGAATTCGGTGGAATGGAGTTTAGGAAATTGGACTGATGGTTGTGTGAGGCAAGAAGGATTGAACTTGAAGTGCGAGATTGTGAAGAATGGATCAAGTTTGGTTAAACAAGATGGATTTTTGTTGAAACATAACATGAAAGTTCCTGATTTTAATGACAGATCACCTGTTACTCAAGATCAATGTGGAGCAGATTGTTTAGCAAACTGTTCTTGTTTGGCATATGCATATGATCCATATATATTTTGTATGCATTGGAGTAGAGAGTTGATTGATTTGCAAACATTTCCTTATGGAGGAGTTGATCTCTTCATTCGTGTCCCGGCGGAACTAGTTGCAGTTGCAGTTCCAGTAAGCAAAAAGAAAAAAGGGACCAAGAAGGGTTTCTTAATCATTGCCATTGTTGGAGGGATAGGAGCATTCACCTTTGCTATATGTGCTTATCTTTTGTGGAGAAAATGTTCTCCTAGGCATAAAGGAAGACATCCTAGAAACTCAATTGTTAGAGAACATAAACAAATGAAGTTGGATGAGCTACCACTATATGAGTTTGAAAAGCTTGAAATTGCTACAAAAAACTTTCACTTTGGTAACATGCTTGGAAAAGGAGGTTTTGGGCCTGTATACAAGGGAGTAATGGATGATGGTCAAGAAATTGCGGTGAAAAGACTTTCGAAATCGTCTGGACAAGGAATTGAAGAGTTCATGAATGAAGTCGTAGTGATTTCTAAACTTCAACATCGCAATCTCGTAAGACTTCTTGGTTGTTGTGTTGAAAGGGGGGAGCAAATGTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGCATTTCTCTTTGATCCACTACAAAAGAAAAACTTAGATTGGAAAAAGAGGTCATACATAATTGAAGGAATCGCTAGAGGCATACTCTATCTTCATAGAGACTCAAGACTAAGGATTATACATAGAGATTTAAAAGCAAGCAACATCTTACTTGACGGCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCAAGAATCGTTAAGGGTGGAGAAGATGACGAAGCTAACACAAAAAGAGTTGTGGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTCTTCTCTGAGAAATCAGATGTCTATAGTTTTGGAGTTTTACTGCTAGAGATTGTTAGCGGACGAAGAAACAGTAGCTTTTATCATAGCGAGGATTCTCTTAGCCTTGTCGGCTTTGCATGGAAACTATGGTTAGAAGAAAACATTATATCTCTAATAGATCCAGAGGTATGGGATGCATGTTTTGAGAGCAACATGTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAAGTTCCAAAAGAAAGACCAAGTATATCAACGGTTGTTTTGATGCTTATAAGTGAGATTACACATCTTCCTCCTCCTGGAAAAGTTGCATATGTTCACAAGCAAAATTCTAGAAGTACAGAATCTTCTCAAAAAAGTCATCAATCTAACTCAAACAATAATGTAACTATGACTGATGTTCAAGGAAGGTAA 2502 0.3785 MAFPTHNKAHFLLFITFLTFCTFFSCYSSITDTLTSSKYLKDNETITSDSTNFILGFFSPLNSTNRYLGIWYINQTNTIWIGNRDQPVTDSNGIVEIQKDGNLVILDKPKGIIIWSTNISSSAKSINSTAQLNDAGNLILRDLSSGLTIWDSFTHPADAAVPSMRIAANKVTGEKISFVARKSENDPSSGSFSISLERLDAPEVFIWHDKKIYWRTGPWNGRIFLGSPRMSTEYLFGWLLNPNDNGTAYITYNFADKNMFGILSLTPHGTLKLVEYSDKKEVLNLEVDQNECDFYGKCGPNGNCDNSTTPICHCFEGFEPKNSVEWSLGNWTDGCVRQEGLNLKCEIVKNGSSLVKQDGFLLKHNMKVPDFNDRSPVTQDQCGADCLANCSCLAYAYDPYIFCMHWSRELIDLQTFPYGGVDLFIRVPAELVAVAVPVSKKKKGTKKGFLIIAIVGGIGAFTFAICAYLLWRKCSPRHKGRHPRNSIVREHKQMKLDELPLYEFEKLEIATKNFHFGNMLGKGGFGPVYKGVMDDGQEIAVKRLSKSSGQGIEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFDPLQKKNLDWKKRSYIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGDMIPKISDFGLARIVKGGEDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHSEDSLSLVGFAWKLWLEENIISLIDPEVWDACFESNMLRCIHIGLLCVQEVPKERPSISTVVLMLISEITHLPPPGKVAYVHKQNSRSTESSQKSHQSNSNNNVTMTDVQGR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4682 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 832 - -
Psa4g4682 833 Pfam Protein tyrosine and serine/threonine kinase 515 783 IPR001245 GO:0004672|GO:0006468
Psa4g4682 833 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 832 - -
Psa4g4682 833 Pfam D-mannose binding lectin 78 182 IPR001480 -
Psa4g4682 833 PIRSF SRK 4 833 IPR024171 GO:0004674
Psa4g4682 833 Gene3D - 25 155 IPR036426 -
Psa4g4682 833 SMART blect_4 37 156 IPR001480 -
Psa4g4682 833 CDD PAN_AP_plant 357 428 - -
Psa4g4682 833 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Psa4g4682 833 MobiDBLite consensus disorder prediction 803 833 - -
Psa4g4682 833 SMART ntp_6 355 427 IPR003609 -
Psa4g4682 833 CDD B_lectin 37 156 IPR001480 -
Psa4g4682 833 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Psa4g4682 833 MobiDBLite consensus disorder prediction 802 833 - -
Psa4g4682 833 SMART serkin_6 514 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4682 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Psa4g4682 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 221 IPR036426 -
Psa4g4682 833 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Psa4g4682 833 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Psa4g4682 833 Gene3D Transferase(Phosphotransferase) domain 1 590 793 - -
Psa4g4682 833 SUPERFAMILY Protein kinase-like (PK-like) 499 820 IPR011009 -
Psa4g4682 833 Gene3D Phosphorylase Kinase; domain 1 487 589 - -
Psa4g4682 833 ProSiteProfiles Protein kinase domain profile. 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4682 833 CDD STKc_IRAK 520 786 - -
Psa4g4682 833 Pfam PAN-like domain 356 413 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4682 Psa-Chr4 415164861 415169433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4682 465 828 Receptor kinase-like Gene Family AT4G23150 52.473 7.33e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g4682 PK_Tyr_Ser-Thr 6.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4682 - - mtr:MTR_8g013600 1308.89