Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4631 ATGCTTGATCATGGAATGCAATATGCTCATGAAAAGTGTTGGGTTGACATCTTTAATGCGATAAGTCAAGCGAAGCATTTGGTTTACATTACGGGTTTGTCAGTGTGGCACAAATTTAGGTTGCTAAGGGACGCCGGTCATTCTCATGGGTTGCATTTCACTCTTGGTGATCTTTTGAAGTCTAAGTCTCAAGAAGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCTTACATCAAGAACCATTCTTGGTTTTGGTACAGATGGTATTATGGCGACTCATGATGTGGAAACTCGGCGATTTTTCAAGAATTCTTCTGTGCAAGTGCTACTTTTTCCTCGTATTGATGGAAAACGATATAGCTGGGCCGGGCTAAAGGATGTTGCACCAAGATTTACACATCATCAGAATACTGTAATTGTGGATGCCGATATGATACTCCCCACCATCCCCTCTTTAGATCACTGCAGACACTGCTGGATGACTATCACAACCCTACTTTCACGGGTAGTACTGGTGGCCTTCCAAGGGAACCATGGCATGACTTGCATTATATTTCGTTCCATTGGATTCAACCTCTGTCATGGGATTTCCAAAGGAGCCAAAGATGCATTGGAAGGGGTGAAATGGAAGTTTCATTTCTTGCTTGATTTCAGTTCGCCATATTTAAGCCACCATATGTGTGACGGAGAAGTGTTAAACATAATTGTTTTACAGAATCTATGCAATAATTTAATTCCGATGGAGATTGCCCTTAAGATTGCTGAAAAAATAAGGCAACGAGAGGTTTGCAGTATACATAATTATTCCAATGTGCCAGAGGGTGATCCAACAGGTGCTGCCACTCAACGGATTATTTTGGCAGTTGGGCTCGAAGCAGTGTTTTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAGCAGTAGATATGCACGAGAACATTATTGGGTCTGGAATTCCTCCCCCACCAAATACTCCACAAGAAAATAGTCGATTTAACCGACGGTTCATGATTAATGTTCATTCAAAAGCCATGATTGTTGATGATGAATATGTGATATTGGGGTCAGCAAACATTAATCAACGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCTTACCAACCTCAATATACATGGGCGAAAAAACAGTCTTATCCACGGGGACAGGTACATGGATACAAAATGTCACTTTGGGGTGAACATACGGGTACAATCGAAGAATATTTCTTACAACCGGAGAGCCTGGACTGTGCGAGAAGAGTTAGAACAATGTCTGAGATGAATTGGAAACAATTTTCATCAAAATATGTGACAGATATGAGAGGACATTTACTAAAGTACCCAGTAGAAGTCAACAGAAAGGGTAAGATTAGATCTCTTCCTGGTGATGAAGAGTTCCCTGATGTTGGAGGAAATATAATAGGATCTTTTCCCTGA 1461 0.4127 MLDHGMQYAHEKCWVDIFNAISQAKHLVYITGLSVWHKFRLLRDAGHSHGLHFTLGDLLKSKSQEGVRVLLLVWDDLTSRTILGFGTDGIMATHDVETRRFFKNSSVQVLLFPRIDGKRYSWAGLKDVAPRFTHHQNTVIVDADMILPTIPSLDHCRHCWMTITTLLSRVVLVAFQGNHGMTCIIFRSIGFNLCHGISKGAKDALEGVKWKFHFLLDFSSPYLSHHMCDGEVLNIIVLQNLCNNLIPMEIALKIAEKIRQREVCSIHNYSNVPEGDPTGAATQRIILAVGLEAVFSPQDYLNFFCLGNREAVDMHENIIGSGIPPPPNTPQENSRFNRRFMINVHSKAMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPQYTWAKKQSYPRGQVHGYKMSLWGEHTGTIEEYFLQPESLDCARRVRTMSEMNWKQFSSKYVTDMRGHLLKYPVEVNRKGKIRSLPGDEEFPDVGGNIIGSFP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4631 486 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 340 367 IPR001736 GO:0003824
Psa4g4631 486 PANTHER PHOSPHOLIPASE D 1 145 IPR015679 -
Psa4g4631 486 PANTHER PHOSPHOLIPASE D 243 485 IPR015679 -
Psa4g4631 486 PANTHER PHOSPHOLIPASE D ALPHA 1 1 145 - -
Psa4g4631 486 PANTHER PHOSPHOLIPASE D ALPHA 1 243 485 - -
Psa4g4631 486 Gene3D Endonuclease Chain A 308 398 - -
Psa4g4631 486 Pfam Phospholipase D C terminal 414 484 IPR024632 -
Psa4g4631 486 Pfam PLD-like domain 343 376 IPR025202 -
Psa4g4631 486 SMART pld_4 340 367 IPR001736 GO:0003824
Psa4g4631 486 SUPERFAMILY Phospholipase D/nuclease 16 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4631 Psa-Chr4 411545933 411549619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4631 185 485 Phospholipase D Gene Family (Wang group) AT2G42010 50.954 9.09e-106 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4631 K01115 - gmx:100805294 369.392