Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4630 ATGATTGAAGGAAAAACAAGTAGGAAGATTACTAGTGGTCCTTACGTGTTAGTTCTTTTGTCAAATGCTATAGTTGGTAGGACTTTTATGATCAGCAATAGAGAAATTCTTGTATGGGAGCAACACTTTTATATTCCTGTTGCACATAATGATGCCGAAGTGCATTTTGTTGTTAAGGATAGTGGTATGGTTGACTCGCAACTTATTGGTATTGTGGCGATCCCGATGGAGCAAATATACTCAGGTGAAAAAGTACTAGGCACTTACCTTATCCTTACTAGCAACGGGAAGCCTTGTAAGCAAGGTGTTGTGTTGAGTGTTTCCATTCAGTTCATTCCAGTAGAGAAGCTAACCATTTATCATCAAGGATTTGGAGAGTGGCCTGACTATATTGGTGTGCCGGGAACTTATTTTTGTTTGAGGAAAGGCGGAACCGTGACTCTATATCAAGACGTTCATGCTCCGGATGGATGCCTCCCTAATGTCATGCTTGATCATGGAATGCAATATGCTCATGAAAAGTGTTGGGTTGACATCTTTAATGCGATAATTCAAGCGAAACATTTGGTTTACATTATGGGTTTGTCAGTGTGGCACAAATTTAGGTTGCTAAGGGACGACGGTCATTCTCATGGGTTGGATTTCACTCTTTGTGATCTTTTTAAGTCCAAGTCTCAAGAAGGAGTAAGAGTGCTTATCCTTGTTTGGGATGACCTTACATCAAGAACCATTCTTGGTTTTGGTACAGATGGTATTATGGCGAGTCATGATGTGGAAACTCAGCGATTTTTCAAGAATTCTTCTGTGCAAGTGCTACTCTTTCCTCGTATTGATAGAAAACAATATAGCTGGGCCAGGCTAAAGGTTTGA 870 0.4034 MIEGKTSRKITSGPYVLVLLSNAIVGRTFMISNREILVWEQHFYIPVAHNDAEVHFVVKDSGMVDSQLIGIVAIPMEQIYSGEKVLGTYLILTSNGKPCKQGVVLSVSIQFIPVEKLTIYHQGFGEWPDYIGVPGTYFCLRKGGTVTLYQDVHAPDGCLPNVMLDHGMQYAHEKCWVDIFNAIIQAKHLVYIMGLSVWHKFRLLRDDGHSHGLDFTLCDLFKSKSQEGVRVLILVWDDLTSRTILGFGTDGIMASHDVETQRFFKNSSVQVLLFPRIDRKQYSWARLKV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4630 289 SUPERFAMILY Phospholipase D/nuclease 173 278 - -
Psa4g4630 289 ProSiteProfiles C2 domain profile. 1 89 IPR000008 -
Psa4g4630 289 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 115 IPR035892 -
Psa4g4630 289 PANTHER PHOSPHOLIPASE D 2 287 IPR015679 -
Psa4g4630 289 Pfam C2 domain 11 89 IPR000008 -
Psa4g4630 289 Gene3D C2 domain 3 120 IPR035892 -
Psa4g4630 289 PANTHER PHOSPHOLIPASE D ALPHA 1 2 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4630 Psa-Chr4 411539969 411541568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4630 2 288 Phospholipase D Gene Family (Wang group) AT2G42010 62.718 3.81e-124 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4630 K01115 - gmx:100805294 409.453