Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4583 ATGCCACGTCAGCTAGAGGTAGGAGTTGTGGCGCTGGGTTTGCCGAAGTGTTACAAACCTAGTGGTGGTGGTGCGACAATGATCGAATGCGCAGTGGCAGAGAATGGAGACCTGCAACATAGCTTTGTATTGTGGGCGACAAGCATTCAAGAAACAATTGAGCGATACCGCAGTCATACAAGGATCCATAATACTCCAACAACATCTGAATCTGCTGAAAATACTCAGCGTTTGAAGGAAGAAGTAGAAAACATGATGAAAAAGATTGATCTTCTCGAGACTTCAAAACGAAAACTGTTAGGAGGAGGCTTAGGGAGTTGTTCCATTGATGAACTACAAAGGATGGAGCAACAGTTGGACAGGAGCATAACCAAAATTCGAGTTAAAAAGGCTGAGGTTTTCGAGGAACAGATTGATCAGCTTAAAGAAAAGGAAAAAACCCTATTTGCTGAAAATACCAGACTCTCTGAGAAGTATGGTAGTTATTCATCACAGCAAGCAAAAAAAGATGACAGGAAAAATATAGCTGAGGCTGAACCAATTTTAGATGTTGAAACTGAATTATTCATTGGTCTTCCAGCAACAAGAACAAGATGA 597 0.4121 MPRQLEVGVVALGLPKCYKPSGGGATMIECAVAENGDLQHSFVLWATSIQETIERYRSHTRIHNTPTTSESAENTQRLKEEVENMMKKIDLLETSKRKLLGGGLGSCSIDELQRMEQQLDRSITKIRVKKAEVFEEQIDQLKEKEKTLFAENTRLSEKYGSYSSQQAKKDDRKNIAEAEPILDVETELFIGLPATRTR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4583 198 Coils Coil 75 95 - -
Psa4g4583 198 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 50 197 - -
Psa4g4583 198 ProSiteProfiles K-box domain profile. 75 165 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa4g4583 198 Coils Coil 112 158 - -
Psa4g4583 198 PANTHER MADS BOX PROTEIN 50 197 - -
Psa4g4583 198 Pfam K-box region 72 159 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4583 Psa-Chr4 408327387 408329697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4583 42 146 MADS-box Gene Family AT2G45660 53.271 6.33e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4583 - - mtr:MTR_8g033220 229.18