Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4582 ATGCATCCTTCCATTTTAGAAACAATAGAACGATACCGCAATCATACAAGGATCCATAATACTCCAACAACATCTGAATCTGCTGAAACTACTCAGCGTTTGAAGGAAGAAGCAGAAAATATGATGAAAAAGATTGATCTTCTCGAGACTTCAAAACGAAAATTCTTAGGCGAAGGTTTGGGGACTTTTTCTATTGATGAACTACAAAGGATAGAGCAACAGTTGGAGAGGAGTATAACCAAAATTCGAGTTAAAAAGGCTGAGGTTTTCAAGGAACAGATGGATCAGCTTAAAGAAAAGGAAAAAACCCTAGTTGCTGAAAGTACCAGACTCTCTGAGAAGTATGATAGTTATTCATCACAGCAAGCAAATAATGATGATCGAGAAAATGTAGTTGAGGTTGAAGCTTATGCAGATCAAAGTAGTCCAAGTTCATACGTGGAGACTGAATTATTCATTGGTCTTCCAGAAACAAGAACAAAAGAATTTCTCCAAACTTGA 501 0.3673 MHPSILETIERYRNHTRIHNTPTTSESAETTQRLKEEAENMMKKIDLLETSKRKFLGEGLGTFSIDELQRIEQQLERSITKIRVKKAEVFKEQMDQLKEKEKTLVAESTRLSEKYDSYSSQQANNDDRENVVEVEAYADQSSPSSYVETELFIGLPETRTKEFLQT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4582 166 PANTHER MADS BOX PROTEIN 8 161 - -
Psa4g4582 166 Coils Coil 31 51 - -
Psa4g4582 166 Coils Coil 65 114 - -
Psa4g4582 166 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 8 161 - -
Psa4g4582 166 Pfam K-box region 28 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa4g4582 166 ProSiteProfiles K-box domain profile. 31 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4582 Psa-Chr4 408299440 408300469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4582 7 102 MADS-box Gene Family AT2G45660 59.184 1.59e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4582 - - mtr:MTR_8g033220 251.136