Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4581 AGCATTCAAGAAACAATTGAGCGATACCGCAGTCATACAAGGATCCATAATACTCCAACAACATCTGAATCTGCTGAAAATACTCAGCGTTTGAAGGAAGAAGTAGAAAACATGATGAAAAAGATTGATCTTCTCGAGACTTCAAAACGAAAACTGTTAGGAGGAGGCTTAGGGAGTTGTTCCATTGATGAACTACAAAGGATGGAGCAACAGTTGGACAGGAGCATAACCAAAATTCGAGTTAAAAAGGCTGAGGTTTTCGAGGAACAGATTGATCAGCTTAAAGAAAAGGAAAAAACCCTAGTTGCTGAAAATACCAGACTCTCTGAGAAGTATGGTAGTTATTCATCACAGCAAGCAAAAAAAGATGACAGGAAAAATATAGCTGAGGCTGAACCAATTTTAGATGTTGAAACTGAATTATTCATTGGTCTTCCAGCAACAAGAACAAGATGA 456 0.3794 SIQETIERYRSHTRIHNTPTTSESAENTQRLKEEVENMMKKIDLLETSKRKLLGGGLGSCSIDELQRMEQQLDRSITKIRVKKAEVFEEQIDQLKEKEKTLVAENTRLSEKYGSYSSQQAKKDDRKNIAEAEPILDVETELFIGLPATRTR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4581 151 ProSiteProfiles K-box domain profile. 28 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa4g4581 151 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 3 150 - -
Psa4g4581 151 Coils Coil 65 111 - -
Psa4g4581 151 Coils Coil 28 48 - -
Psa4g4581 151 PANTHER MADS BOX PROTEIN 3 150 - -
Psa4g4581 151 Pfam K-box region 25 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4581 Psa-Chr4 408294103 408295248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4581 1 99 MADS-box Gene Family AT2G45660 56.436 3.15e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4581 - - mtr:MTR_8g033220 230.335