Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4579 ATGATGAAAAAGATTGATCTTCTTGAGACTTCAAAACGAAAATTCTTAGGCGAAGGTTTGGGGAGTTTTCCTATTGATGAACTACAAAGGATAGAGCAACAGTTGGAGAGGAGTATAACCAAAATTCGAGTTAAAAAGGCTGAGGTTTTCAAGGAACAGATGGATCAGCTTAAAGAAAAGGAAAAAACCCTAGTTGCTGAAAGTACCAGACTCTCTGAGAAGTATGATACTTATTCATCACAGCAAGCAAATAATGATGATAGAGAAAATGTAGTTGAGGTTGAAGCTTATGCAGATCAAAGTAGTCCAAATTCATACGTCGAGACTGAATTATTCATTGGTCTTCCAGAAACAAGAACAAGAAGAATTTCTCCAAACTTGAGGATTAATTAA 393 0.3562 MMKKIDLLETSKRKFLGEGLGSFPIDELQRIEQQLERSITKIRVKKAEVFKEQMDQLKEKEKTLVAESTRLSEKYDTYSSQQANNDDRENVVEVEAYADQSSPNSYVETELFIGLPETRTRRISPNLRIN* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4579 130 Coils Coil 25 74 - -
Psa4g4579 130 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa4g4579 130 PANTHER MADS BOX PROTEIN 2 120 - -
Psa4g4579 130 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa4g4579 130 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 2 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4579 Psa-Chr4 408269737 408272671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4579 1 62 MADS-box Gene Family AT2G45660 64.516 1.66e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4579 - - mtr:MTR_8g033220 195.282