Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4544 ACCGCCGAGATGTTACGTCAGTTAAATCTCTCTTGAGAGGCGCGTTTGGGAAGCCGTTGGGGACGTGTGCTAGGGTGAGTATTGGACAGGTGCTGTTGTCTGTTAGGTGTAAGAGTGGGAATGGTCAGCATGCTCAAGAGGCTCTTCGTCGGGCTAAGTTCAAGTTCCCCGGTCGTCAGAAAATTATTGTTAGTAGAAAGTGGGGTTTTACTAAATTGGGTCAAGAGGAGTACTTGAAGTTGAAATCTGAGAACAGAATTGTGCCAGATGGTGTAAATGCTAAGGTTCTTGGGTGCCATGGACCTTTGGCCAATCGTCAGCCAGGAAGAGCTTTCTTGCCAATCTCTGCTTAG 353 0.4788 RRDVTSVKSLLRGAFGKPLGTCARVSIGQVLLSVRCKSGNGQHAQEALRRAKFKFPGRQKIIVSRKWGFTKLGQEEYLKLKSENRIVPDGVNAKVLGCHGPLANRQPGRAFLPISA* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4544 116 PANTHER 60S RIBOSOMAL PROTEIN L10-LIKE 8 113 - -
Psa4g4544 116 CDD Ribosomal_L16_L10e 12 62 IPR016180 GO:0003735|GO:0005840|GO:0006412
Psa4g4544 116 Gene3D - 76 110 - -
Psa4g4544 116 Pfam Ribosomal protein L16p/L10e 16 62 IPR016180 GO:0003735|GO:0005840|GO:0006412
Psa4g4544 116 Gene3D Ribosomal protein L10e/L16 4 75 IPR036920 GO:0003735|GO:0005840|GO:0006412
Psa4g4544 116 PANTHER 60S RIBOSOMAL PROTEIN L10 8 113 IPR001197 GO:0003735|GO:0005840|GO:0006412
Psa4g4544 116 SUPERFAMILY Ribosomal protein L16p/L10e 11 71 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4544 Psa-Chr4 405094449 405094993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4544 11 116 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 79.245 5.11e-59 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4544 K02866 - gmx:100779884 192.586