Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4534 ATGGTGAAAATGAATACCAAAGAAACACTTGTTTTACTCTTTGCATCTTTCTTGTTCCTATCTTGTGGCTATGCACAAGATACTATTGTACCAGCTATCATCACATTTGGTGATTCTGCTGTGGATGTAGGGAATAATGACTACCTTCCTACTATTTATAAGGCTAACTATCCTCCTTATGGGAGAGATTTTGTTAACAAACAGGCTACTGGAAGGTTTTGTAATGGCAAATTAGCTACTGATATTACAGCTGAAACACTTGGTTTTAAGAATTTTGCACCTGCATATCTCAGTCCACAGGCATCAGGAAATAACCTCCTTACTGGTGTAAACTTTGCTTCAGCTGCATCTGGTTATGACGAAAAGGCTGCTACCTTGAATCATGCACTTACATTATCCCAACAGTTAAGTTATTTCAAGGAATATCAAGGCAAGTTGGCACAGGTTGCTGGCAGCAGAAAAGCTGCATCAATTATCAAAGGTTCATTGTACTTATTGAGTGCTGGAAGCAGTGATTTTGTGCAAAATTATTATGTTAATCCTTGGATCAACAAAGCAATCACTGTTGATCAGTATTCTTCTTACCTACTAGACTCATTCAACACCTTCATTAAGGGCTTGTATGGATTAGGGGCAAGGAAAATTGGAGTGACTTCACTTCCACCATTGGGGTGCCTACCAGCTGCAAGGACTTTATTTGGTCACCATGAGAACGGTTGTGTCTCAAGAATCAACACTGACGCACAAGGATTTAACAAGAAAATTAACTCAGCTGCATCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGGTTGTGATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAGAGCCCTTCAAATTTCGGTTTCGCTGAGGCGGGGAGAGGATGCTGTGGTACAGGAACGATCGAATTAACATCACTATTGTGCAATACAAAATCACCAGGAACTTGTTCTAATGCAACTCAGTATGTGTTCTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTTTGGCCGATTCTTTACTCGTACAAGGCATATCTCTCATCACATAA 1068 0.3979 MVKMNTKETLVLLFASFLFLSCGYAQDTIVPAIITFGDSAVDVGNNDYLPTIYKANYPPYGRDFVNKQATGRFCNGKLATDITAETLGFKNFAPAYLSPQASGNNLLTGVNFASAASGYDEKAATLNHALTLSQQLSYFKEYQGKLAQVAGSRKAASIIKGSLYLLSAGSSDFVQNYYVNPWINKAITVDQYSSYLLDSFNTFIKGLYGLGARKIGVTSLPPLGCLPAARTLFGHHENGCVSRINTDAQGFNKKINSAASNLQKQLPGLKVVIFDIYKPLYDLVQSPSNFGFAEAGRGCCGTGTIELTSLLCNTKSPGTCSNATQYVFWDSVHPSEAANQVLADSLLVQGISLIT* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4534 355 SUPERFAMILY SGNH hydrolase 33 346 - -
Psa4g4534 355 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Psa4g4534 355 PANTHER GDSL ESTERASE/LIPASE EXL3 3 354 - -
Psa4g4534 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Psa4g4534 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Psa4g4534 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 354 - -
Psa4g4534 355 Gene3D SGNH hydrolase 23 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4534 Psa-Chr4 404786003 404788720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4534 4 351 Pollen Coat Proteome AT1G75910 37.322 2.87e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4534 - - vun:114167332 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4534 4 404786003 404788720 Psa4g4534 4 404786003 404788720 ECH
Psa5g6782 5 562157137 562159128 Psa4g4534 4 404786003 404788720 PCT