Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4533 ATGGGTACAACGGACAGATACAAGGATGATGTTTATGACCGGGTCTGGTTTCCTTTTAAATGGGATGCGATGAAAAAACTAAGCACCGATGAGGATGTTTTAAATTCGGATAGTTTTGAGCCACCATCAATTGTTATGAGCACTGCCGTTACACCATTTAATGCCAGTGCCCCAATACAATTGTTTTGGGATTCAGATGATGTAAATGACCAATACTACTTCTACATGTACTTTAATGAGGTTGAGAAGCTGGCTGAAAATGAAACTAGAGAATTCAATATCATGATGAATGGAGAACTTATGTATGGACCTGAGATACCTCCATACCGATCAGTTGATCCCATAATTAGTACATCAGCTTTGACTGGAGCCAAAAGGTATACATTTTCCCTTGAGAAGACAGAAAATTCAACCCTTCCACCCATCCTCAATGCCATGGAGTTTTATAAACTAATAGACTTCTCACTATCAGAAACTCAACAGGATGATGTTGATGCTATCACAAACATCAAGAAGACTTATGGGGTGACTAGAAATTGGGAAGGAGATCCATGTGGTCCTGTGAAGTATATGTGGGAAGGTCTAAACTGCACTATGAATGATGGCCTTGACCCTCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGCAGATAGCATCTTCTATATCAAAGCTCACCATGTTGCAGTATTTGGATTTATCCAATAATAGCTTAAATGGTTCCTTACCTTATTTCTTGGTGGAACTAAGGTCACTAAAAGTACTAAATGTGAGATATAACAATTTTACAGGATTAATTCCAAGTGAACTCCTTGAAAGATCAAAAACAGGTTCTTTGTCACTAAGTGTAGATGGTGATAGTAATAGTGATAGTGATAGTATTCCCCCAACAAAATCAGGCAAAAACAAGAATTTGTCTGTACCGCTTACTGCATCATTTTCGGCATTATGTGTAATCCTTTTGATTTTGCTTGGATTTTGGATATTCAGAAGACATAAAGTTACGTCTTCAAAGTCTAAGAAAGGAGATTCAAAGAATTCAAAACAACAAGTATTCAGCTATGGAGAAATTATAAATATTACTGAAAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTGTACATTGGCATTCTACAAGATCAAACTCATGTCGCTGTTAAGAGGCTTTCACCATCATCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAACGATTGTTCATCATAAAAATTTGGTCTCCCTCATTGGATATTGTGATGAAGGTGAAATAAAAGCATTAATATATGAGTACATGGCCAATGGAAATCTACAACAACACTTGTTAGGTAATTTATATTATAACAGCAATATTTTAAAGGCTAACAAGTGA 1401 0.3619 MGTTDRYKDDVYDRVWFPFKWDAMKKLSTDEDVLNSDSFEPPSIVMSTAVTPFNASAPIQLFWDSDDVNDQYYFYMYFNEVEKLAENETREFNIMMNGELMYGPEIPPYRSVDPIISTSALTGAKRYTFSLEKTENSTLPPILNAMEFYKLIDFSLSETQQDDVDAITNIKKTYGVTRNWEGDPCGPVKYMWEGLNCTMNDGLDPPRITSLNLSSSGLTGQIASSISKLTMLQYLDLSNNSLNGSLPYFLVELRSLKVLNVRYNNFTGLIPSELLERSKTGSLSLSVDGDSNSDSDSIPPTKSGKNKNLSVPLTASFSALCVILLILLGFWIFRRHKVTSSKSKKGDSKNSKQQVFSYGEIINITENFKTIIGEGGFGKVYIGILQDQTHVAVKRLSPSSMQGYKEFQSEAQLLTIVHHKNLVSLIGYCDEGEIKALIYEYMANGNLQQHLLGNLYYNSNILKANK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4533 466 SUPERFAMILY L domain-like 156 300 - -
Psa4g4533 466 PANTHER OS07G0107800 PROTEIN-RELATED 6 465 - -
Psa4g4533 466 Pfam Malectin-like domain 6 150 IPR024788 -
Psa4g4533 466 ProSiteProfiles Protein kinase domain profile. 366 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4533 466 Pfam Protein tyrosine and serine/threonine kinase 368 452 IPR001245 GO:0004672|GO:0006468
Psa4g4533 466 MobiDBLite consensus disorder prediction 285 305 - -
Psa4g4533 466 Gene3D Phosphorylase Kinase; domain 1 338 441 - -
Psa4g4533 466 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 6 465 - -
Psa4g4533 466 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Psa4g4533 466 Gene3D Ribonuclease Inhibitor 164 302 IPR032675 -
Psa4g4533 466 SUPERFAMILY Protein kinase-like (PK-like) 349 456 IPR011009 -
Psa4g4533 466 Pfam Leucine rich repeat 206 266 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4533 Psa-Chr4 404770397 404779000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4533 2 453 Receptor kinase-like Gene Family AT2G14440 44.639 8.36e-121 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa4g4533 Malectin_like 6.9e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4533 - - mtr:MTR_8g014690 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4533 4 404770397 404779000 Psa4g4533 4 404770397 404779000 ECH