Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4529 ATGATGAGAGTATCCCTACATTTTCTTTCAGTATTGCTATGTGTCCATGCTATTTTTGTTTTGATACAAGCTCAGGATCAATCAGGATTCATCAGCATAGACTGTGGTCTACCTGAAAAATCAAGCTATGCTGAGACAACCACAGGCATAAACTACATTTCAGATGCAAAATTCATAGATACAGGTGTATCTATCAGGATACCCCCTATAGGCAACACTGTTCTACAGCAACTAGAACATGTAAGAAGCTTTCCTACTGGAGTGAGAAACTGTTACAGAATAGATGTAACCAATGGTACTAAATATTTAATCAGAGCTTCATTCTACTATGGAAACTATGATGATCAAAATGATCCACCACAATTTGATCTTCATTTTGGACCTAATGTGTGGGATACAGTGAAATTCACCAACTTATCACGCATCGCAACCAGTGAGATCATTTACACTCCGTCACTAGAGTACATACAACCATGTCTTGTTAACACAGGCAAAGGAACTCCTTTCATTTCCGTCATAGAATTGAGGACTTTGAACAATCAAGCTTATGTCACACACTCAACTAAATCAGTGTTATCAAATTTCTTTCGATTTGACTTAGGTTCCATCACAAACTTGGAATACAGGTACAAAGACGATGATTATGACCGGGTCTGGTTTCCTTTTAAATGGGATGAGATGAAAAAACTAAGCAGCAATGAAGATATATTAACTCAGAATATTTATAAACCACCAGGAATTGTTATGAGTACTGCTGTTACACCATTTAATGAAAGTGCTCCTATACAATTTAGTTGGAATTCGGATCATCTAAATGACCAATATTACTCATATTTGCACTTCAATGAGGTTGAGAAGCTGGCTGAAAATGAAACTAGAGCATTCAATATCATGATGAATGGAGAACTTATGTATGGACCTGAGATACCTGCATACCGATCAGTAGATACCATATTTAGTACAGTAACTTTGACTGGAGCCAGAAAGTATATATTTTCACTTTCAAGGACAGAGAATTCAACTCTTCCACCCATCATCAATGGCTTTGAGGTTTATAAACTAATAGACTTCTCACAATCAGAAACAAACCAGGATGATGTTGATACTATCACAAGCATCAAGAAGGCTTATGGGGTGGCTAAAACTTGGGAAGGAGATCCATGTGGTCCTGTGAAGTATATGTGGGAAGGTCTAAACTGTAGTATTGGTGATAGCAATAACCCTCCAAGAATCACATCTTTGGATTTATCAAACAATAGCTTAAACGGTCCTTTACCAGATTTTCTGATACAACTGCGGTCACTAAAAGTATTAAATGTGGGAAAGAACAATCTTACAGGGTTAGTTCCAAGTGGATTACTTGAGAGGTCAAAAAGAGGTTCACTATTATTGAGTGTGGATGATAATCATGACCTTTGTATGAAGGAATCATGCAAAAAGAAGAAATCGTTCGTAGCACTTATTGCATCATTGTCTGCATTACTTGTAATCCTCTTGCTTTTACTTGGATTTTGGATATTCAAAAAGCGAAAAGTACTTATGTCTTCAAATTCTAAGAGAGAAGGTTCAAAGGCATCAAAACATCAAATATTCAGTCATGCTGAAATTCTAAATATTACTGAAAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTGTACATTGGCATTCTACAAGATCAAACTCATGTCGCTGTTAAGAGGCTTTCACCATCATCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAACGATTGTTCATCATAAAAATTTGGTCTCCCTCATTGGATATTGTGATGAAGGTGAAATAAAAGCATTAATTTATGAGTACATGGCCAATGGAAATCTACAACAACACTTGTTAGGCGGAAATTCAAATATCTTAAAATGGAATGACAGGCTTAACATTGCAATTGATGCGGCATACGGAATTGATTATATGCATAATGGAATTAAACCCCCTATTGTGCATAGAGATTTGAAGCCTTCCAACATATTATTAGATGAAAAAATGCATGCCAAGATTGCAGATTTTGGTCTAAGTAGAGTTTTTGGTAACGAGATTGATTCACATATATCCACACGCCCAGCTGGTACATTTGGCTACCTTGATCCTGAGTAA 2139 0.3628 MMRVSLHFLSVLLCVHAIFVLIQAQDQSGFISIDCGLPEKSSYAETTTGINYISDAKFIDTGVSIRIPPIGNTVLQQLEHVRSFPTGVRNCYRIDVTNGTKYLIRASFYYGNYDDQNDPPQFDLHFGPNVWDTVKFTNLSRIATSEIIYTPSLEYIQPCLVNTGKGTPFISVIELRTLNNQAYVTHSTKSVLSNFFRFDLGSITNLEYRYKDDDYDRVWFPFKWDEMKKLSSNEDILTQNIYKPPGIVMSTAVTPFNESAPIQFSWNSDHLNDQYYSYLHFNEVEKLAENETRAFNIMMNGELMYGPEIPAYRSVDTIFSTVTLTGARKYIFSLSRTENSTLPPIINGFEVYKLIDFSQSETNQDDVDTITSIKKAYGVAKTWEGDPCGPVKYMWEGLNCSIGDSNNPPRITSLDLSNNSLNGPLPDFLIQLRSLKVLNVGKNNLTGLVPSGLLERSKRGSLLLSVDDNHDLCMKESCKKKKSFVALIASLSALLVILLLLLGFWIFKKRKVLMSSNSKREGSKASKHQIFSHAEILNITENFKTIIGEGGFGKVYIGILQDQTHVAVKRLSPSSMQGYKEFQSEAQLLTIVHHKNLVSLIGYCDEGEIKALIYEYMANGNLQQHLLGGNSNILKWNDRLNIAIDAAYGIDYMHNGIKPPIVHRDLKPSNILLDEKMHAKIADFGLSRVFGNEIDSHISTRPAGTFGYLDPE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4529 712 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Psa4g4529 712 SUPERFAMILY L domain-like 405 454 - -
Psa4g4529 712 Gene3D Ribonuclease Inhibitor 367 470 IPR032675 -
Psa4g4529 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Psa4g4529 712 Gene3D Phosphorylase Kinase; domain 1 510 616 - -
Psa4g4529 712 PANTHER OS07G0107800 PROTEIN-RELATED 414 712 - -
Psa4g4529 712 PANTHER OS07G0107800 PROTEIN-RELATED 19 414 - -
Psa4g4529 712 SUPERFAMILY Protein kinase-like (PK-like) 525 712 IPR011009 -
Psa4g4529 712 Pfam Malectin-like domain 33 353 IPR024788 -
Psa4g4529 712 Gene3D Transferase(Phosphotransferase) domain 1 617 712 - -
Psa4g4529 712 ProSiteProfiles Protein kinase domain profile. 541 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4529 712 SMART serkin_6 541 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4529 712 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 19 414 - -
Psa4g4529 712 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 414 712 - -
Psa4g4529 712 Pfam Protein tyrosine and serine/threonine kinase 543 693 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4529 Psa-Chr4 404707523 404717054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4529 4 712 Receptor kinase-like Gene Family AT2G19210 45.467 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa4g4529 Malectin_like 2.9e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4529 - - mtr:MTR_8g014700 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4529 4 404707523 404717054 Psa4g4529 4 404707523 404717054 ECH