Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4491 ATGTCGTCTCTACAATCATTTGCTTTCATTTTAATACTTATAATTCTTTTTTTCGATATTTGTGAATCCAATGATTGTAGCAATCCTTCTAAAACCATAACTGTTAATCAATCAGGCAAAGCAAATTTCAAAACAATCCAAAGTGCCATTGATTCTGTCCCTGAAGGAAACTCTCAATGGATTCATATCCAAATTTCCTCTGGTGTTTACAAAGAGCAAATATATATCCCACGGAACAAACCATGCATCTATCTTGAAGGGTTTAGTAGACAAACCACAAGTGTAGAATGGAGTATACATGAAAATGCTACGTTCGAAACAAGAGCAAATAATACAGCGGCAAAAGGCATTACTTTTGCGAATACATTGAACAGTCCAGTGTTAGAGGTGAATGGCATCACACAAGGTGTAGCTGCTAGAATTCGTGCAGATAAATGTGTTTTCTACGATTGTGGTTTTCTTGGGGTGCAAGATACTCTATTTTCAGATATTGGTCGCCATTACTTCAAAAAATGTTTCATCCAAGGTGGAGTCGATTTCATATTCGGCAATGGTCAATCAATCTTTGAGGATAGTAATATATTTTTTTGGATGGGGAGAAATGGTCCGAAAAGCGATGGAGTTATTACAGCACATTATAGAAAATCACCAGATGATCCAAGTGGATTTGTGTTTAATAGATGTAAAATAAGTGGTTATGGAGGAAAGTTTGAACTTGGGAGAGCTATGGAAGCTTATGCAAGAGTGATCGTAGCGAATTCCTACGTATCAGATTCTGTTAAACCTGAGGGTTGGAGCCCTAGATTATGTGTTGGACATGAAGCAAATCTTACTTTTGTGGAGGAGAAATGCTTTGGAGGTGGAGCAGACAAATCAAAACGCGTGAAATGGATGAAGAGCTTGAGTGGAGATGAACTTAATAAGTTCTTGAGTCTCTCTTTTATTGATCAAGAAGGATGGATTTCGAAATTGCCGACGAACATGTTCAGTTGA 993 0.3736 MSSLQSFAFILILIILFFDICESNDCSNPSKTITVNQSGKANFKTIQSAIDSVPEGNSQWIHIQISSGVYKEQIYIPRNKPCIYLEGFSRQTTSVEWSIHENATFETRANNTAAKGITFANTLNSPVLEVNGITQGVAARIRADKCVFYDCGFLGVQDTLFSDIGRHYFKKCFIQGGVDFIFGNGQSIFEDSNIFFWMGRNGPKSDGVITAHYRKSPDDPSGFVFNRCKISGYGGKFELGRAMEAYARVIVANSYVSDSVKPEGWSPRLCVGHEANLTFVEEKCFGGGADKSKRVKWMKSLSGDELNKFLSLSFIDQEGWISKLPTNMFS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4491 330 SUPERFAMILY Pectin lyase-like 29 327 IPR011050 -
Psa4g4491 330 Gene3D - 26 328 IPR012334 -
Psa4g4491 330 PANTHER PECTINESTERASE 1 327 - -
Psa4g4491 330 Pfam Pectinesterase 33 316 IPR000070 GO:0030599|GO:0042545
Psa4g4491 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4491 Psa-Chr4 398422415 398423764 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4491 31 322 Carbohydrate Esterase AT5G47500 36.129 1.45e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4491 - - cam:101494460 441.81