Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4489 ATGCAGTCTCTACAATCATTTGTTTCCATTTTAATATTTGTAGTTCTTGCGTTTGATGTTTGTGAATCCGGTGATTGTAACAATCCCTTGAAGAGCATTACTGTTGGTCAATCAGGCAAAACAGATTTTAAGACAATTCAAAGTGCCATTGATTCTGTCCCAGCAGGAAATTCTCAATGGATTCATATCCAAATTTCTTCTGGTGTTTACAAAGAGCATGTCTTAATTCCCAAAAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGTCAGTCTACAAGTATAGAATGGGGCTCTCATGAAATTGCTACCTTCGATATAAAAGGAAGCAATACTGTTGCAAAGGGCATAACTTTTACGAATATACTGAACAACCCAATATTATTAGAGGCCACTAACATCACACAAGCAAGAGCTGCTAAAATTCATGCAGATAAATGTGCTTTCTATAGCTGTAGTTTTCTTGGAGTGCAAGATACCCTAAATGATGACTCCGGTCGCCATTACTACAACAACTGTTACATCCAAGGTGCGGTTGATTTCATATATGGGCAAGGTCAATCGCTCTTTGAGGCAAGTACGATATATTTTTCAACGGGAAAGTCGGGTCTAAAAAAGAATGGAGTTATTACAGCACAATATAGAGATTCACCAAATGATCCAAGTGGATTTGTGTTTAAAAATTGTAACATAAGTGGGACAGGAGGAAAGTTTCAACTTGGAAGAGCTATGGACTCTTATGCAAGAGTGATCATAGCAAATTCTTACCTATCAGATGCTGTTAGACCTGAGGGTTGGAGTCAGACGACATATGTCGGCCACGAATCAAAGCTTACTTTTGTGGAGGAGGGATGCAAAGGTCCTGGAGCAGACAAATCAAAACGCGTGAAATGGATGAAGAGTTTGAGTGGACATGAACTTGATAAGTTCTTGAGTCTCTCTTTTATTGATCAAGAAGGATGGATTTCTAAATTGCCAGCAAGAATATTCCATTAA 996 0.3835 MQSLQSFVSILIFVVLAFDVCESGDCNNPLKSITVGQSGKTDFKTIQSAIDSVPAGNSQWIHIQISSGVYKEHVLIPKNKPCIYLEGAGSQSTSIEWGSHEIATFDIKGSNTVAKGITFTNILNNPILLEATNITQARAAKIHADKCAFYSCSFLGVQDTLNDDSGRHYYNNCYIQGAVDFIYGQGQSLFEASTIYFSTGKSGLKKNGVITAQYRDSPNDPSGFVFKNCNISGTGGKFQLGRAMDSYARVIIANSYLSDAVRPEGWSQTTYVGHESKLTFVEEGCKGPGADKSKRVKWMKSLSGHELDKFLSLSFIDQEGWISKLPARIFH* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4489 331 SUPERFAMILY Pectin lyase-like 33 324 IPR011050 -
Psa4g4489 331 PANTHER PECTINESTERASE 1 328 - -
Psa4g4489 331 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Psa4g4489 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 328 - -
Psa4g4489 331 Gene3D - 30 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4489 Psa-Chr4 398341133 398400524 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4489 33 322 Carbohydrate Esterase AT1G05310 39.274 4.00e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4489 - - cam:101494460 476.863