Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4470 ATGGACACAAAACACCGCGCCGTGCGGAACCTAGTCTCAAAGCTAAGCTCCGTTTCCGAACGAACCCGAATCGAAGCTCTCTGCGAGCTTCGGCAAATGTCAAAACAAGACCCGGAAACCCGACCCGTAATTACAGAATCAGGCGCGATTCCGTACCTAGCAGAAACTCTCTATTCTTCTTCTCATCCGTCGCAAGAAAACGCAACCGCAACGCTTCTTAACCTTTCCATAACAGAAAAAGAACCTATCATGTCCACACGCGGTGTTCTCGACGCGCTCGCACACGTTATATCTCATCATTCTTCAACCTCCGCCGCCGCCGCTGTTCAATCCGCCGCCGCTACAATTCACAGCCTTCTTTCGTCTGTCGATGATTACCGTACTGTCGTTGGATCCAAACGCGAGATCGTTTATGCGCTTGTTGATATCCTCCGTTGTCACCGTTCATCACCGCCGCGAACGGTTAAAGACGCGTTGAAAGCGCTTTTCGCAATCGCGCTTCATCCGTTAAACCGTGGTACTATGGTTCAGTTTGGTGTTGTTCCGGCGCTGTTCTCTCTCATCGTTAACGATGGTAGAGTAGGGATAGTTGAAGACGCAACCGCCGTCATCGCGCAGGTTGCCGGTTGCGAAGAAAGCATTGAGGCTTTCCGGAAGGTTTCCGGTGTTGGGGTACTCGCGGATCTACTCGATCTTGCGACTGGTTCTAGTATGAGGACGAGAGAAAATGCAGTGTCGGCGCTGCTTAATCTTGTGCGATGCGGCGGAGATGCGGTGGCCGGAGATGTTAGAGACGCCGTAGCTTTTGGTGCGTTGGACGGAATTGGTGATGTTAGAGATAAAGGGAGCGCTAAGGGGAAGAGTAAGGCTACGGAGTTGATGAAGGTGATGCTTGGTAATGGTCATAGTAATGTCGTTTTCAATAGTGGTTCGTCGTTTGGTTCTTCTCCGATGAATGAATTTAGTGGATCGTCGTTTTGA 981 0.5066 MDTKHRAVRNLVSKLSSVSERTRIEALCELRQMSKQDPETRPVITESGAIPYLAETLYSSSHPSQENATATLLNLSITEKEPIMSTRGVLDALAHVISHHSSTSAAAAVQSAAATIHSLLSSVDDYRTVVGSKREIVYALVDILRCHRSSPPRTVKDALKALFAIALHPLNRGTMVQFGVVPALFSLIVNDGRVGIVEDATAVIAQVAGCEESIEAFRKVSGVGVLADLLDLATGSSMRTRENAVSALLNLVRCGGDAVAGDVRDAVAFGALDGIGDVRDKGSAKGKSKATELMKVMLGNGHSNVVFNSGSSFGSSPMNEFSGSSF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4470 326 Gene3D - 2 274 IPR011989 -
Psa4g4470 326 SUPERFAMILY ARM repeat 5 258 IPR016024 -
Psa4g4470 326 PANTHER U BOX DOMAIN-CONTAINING 2 305 - -
Psa4g4470 326 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Psa4g4470 326 SMART arm_5 210 253 IPR000225 GO:0005515
Psa4g4470 326 SMART arm_5 122 167 IPR000225 GO:0005515
Psa4g4470 326 SMART arm_5 168 209 IPR000225 GO:0005515
Psa4g4470 326 SMART arm_5 37 77 IPR000225 GO:0005515
Psa4g4470 326 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 305 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4470 8 304 U-box Gene Family AT2G23140 33.221 3.59e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4470 - - mtr:MTR_8g039560 487.648