Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4455 GTTTTGTTAAGATTAGAAATGCAAGAGAGTCATTCACAAGTCATAAAGCAATATGTGGAGCTTTGTTGGCTTGGCAATTACGGGATTCTAGTGAACTTGAAGAGTTTGATGGGACATTAGTTCACTTCATTTATTCTGCTTCTATTGGACTTAACCATGAGGGTGATAAGTATAAGGTGGCAAAACATTGGGGCCACATTCATATTGTGACAATGAAATGGTTTGATCAATCTGTTGCTCGAAGAACATGTCTGAATGAGGAGTCCTACCCTGTTCAGAATGGATCTTTATCTTCACGTAAGGCGACTAGGGACTTAACAGTGAAACATAGCCAGGATAGGGATATTGGGAAAATGCAATCTGGATCATCCTCAAGAGCTGCAGATTCAAATATGCCAGTTTCTGATTGTGCTGAGTCTATGGATGTAGATCTAGAAACTACACAGTCAGAACATATGTCGTCTTTTTCAAATGTTCCATTATTTGTTAAAGAGGCAGACGCTGAAGCACCTACATTGCAGACTAGCGATGAATTGAACTTGGACGGTGCTGCTGCCAATGATTCTGAATCTGATGACAATGACCTATACTTAGCAGAATGTAGAATATTACTTGCTGGTTTTGAAGCTTCTGAAATGCGGAAGCTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATACATGTATTTTAATGATAAGTTGACACACATAGTAATTGGGAATCCTACAGAAATAGAAAAGAAGGAAGTAAGAAGTATTGCTGCTCTTGGTGTCGTTTATGTTGTTAAAACCTCATGGCTTGAAGACTGTGACCGTGTAAAGAAACAAGTCCCTGTTCTTCGACGACACATTGCATGTGATCTTTTTCTTCCAAAAGCCAACTCAGTAAAAGGAGCGGTCACTGGCATTATGCCTATGGATCAAAGTAAAAGCTCAAGCATTCGCCAAAGCTTTCAAACTAATCAGGTGGCGGGTATTAAGGACTTTGGAGTTACGATACCAGAATCTTTGGATAAAAACAAACAAGAGAAACACAGTATGGGACATTGCCGCAGTTATTGTTGCTTTTCTCATTGGTGTTTCGCTGCACTGGAGAATAGCTCTCGTGGCTTTGGCAACACTTCCGATTCTCTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTACTGGTTTTTCAAGGGGCATACAGGAAATGCACCGAAAAGCATCTTTGGTTCTTGA 1223 0.4056 FVKIRNARESFTSHKAICGALLAWQLRDSSELEEFDGTLVHFIYSASIGLNHEGDKYKVAKHWGHIHIVTMKWFDQSVARRTCLNEESYPVQNGSLSSRKATRDLTVKHSQDRDIGKMQSGSSSRAADSNMPVSDCAESMDVDLETTQSEHMSSFSNVPLFVKEADAEAPTLQTSDELNLDGAAANDSESDDNDLYLAECRILLAGFEASEMRKLVNMVRKGGGSRYMYFNDKLTHIVIGNPTEIEKKEVRSIAALGVVYVVKTSWLEDCDRVKKQVPVLRRHIACDLFLPKANSVKGAVTGIMPMDQSKSSSIRQSFQTNQVAGIKDFGVTIPESLDKNKQEKHSMGHCRSYCCFSHWCFAALENSSRGFGNTSDSLCFCYCPEIVAYWFFKGHTGNAPKSIFGS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4455 406 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 41 328 - -
Psa4g4455 406 ProSiteProfiles BRCT domain profile. 41 91 IPR001357 -
Psa4g4455 406 SUPERFAMILY BRCT domain 33 95 IPR036420 -
Psa4g4455 406 MobiDBLite consensus disorder prediction 90 132 - -
Psa4g4455 406 SMART BRCT_7 194 274 IPR001357 -
Psa4g4455 406 MobiDBLite consensus disorder prediction 116 130 - -
Psa4g4455 406 Gene3D BRCT domain 177 281 IPR036420 -
Psa4g4455 406 Gene3D BRCT domain 5 94 IPR036420 -
Psa4g4455 406 SUPERFAMILY BRCT domain 192 278 IPR036420 -
Psa4g4455 406 ProSiteProfiles BRCT domain profile. 192 284 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4455 Psa-Chr4 395946346 395947813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4455 34 312 Core DNA Replication Machinery Family AT1G77320 45.907 2.67e-71 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4455 K10728 - gmx:100804966 417.927