Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4436 ATGGTTATGGCTTCAGAGACCCAGTTTCATGTTTTGGCTGTTGATGATAGTATTGTTGACAGAATGCTGATTGAAAAGCTTCTTAAAACTTCTTCATTTCAAGTTACTACAGTGGACTCAGCTACTAAGGCTTTAAAATTTCTTGGTTTGGTTGATGATATTGCTTCAGAAATTCATCAGGAAGTAGAAGTAAATTTGATCATAACAGATTATTGTATGCCAGGGATGACAGGTTATGATCTACTCAGAAAAATCAAGGAATCCAAATCTTTTAAGGACATACCTGTTGTGATTATGTCTTCTGAGAATGTCCCATCTAGAATAAATAGGTGTATGGAAGAGGGAGCTGAAGAATTCTTCCTGAAACCAGTTAAACAATCAGATGTAAACAAGCTGAAACCTCATTTGTTGAAATCAAGAGTTAGTGAAGAGCATGAATAA 441 0.3515 MVMASETQFHVLAVDDSIVDRMLIEKLLKTSSFQVTTVDSATKALKFLGLVDDIASEIHQEVEVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCMEEGAEEFFLKPVKQSDVNKLKPHLLKSRVSEEHE* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4436 146 Pfam Response regulator receiver domain 11 129 IPR001789 GO:0000160
Psa4g4436 146 SUPERFAMILY CheY-like 8 132 IPR011006 -
Psa4g4436 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 144 IPR045279 GO:0009736
Psa4g4436 146 Gene3D - 10 146 - -
Psa4g4436 146 ProSiteProfiles Response regulatory domain profile. 10 137 IPR001789 GO:0000160
Psa4g4436 146 SMART REC_2 9 136 IPR001789 GO:0000160
Psa4g4436 146 PANTHER RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN 2 144 - -
Psa4g4436 146 CDD REC_typeA_ARR 11 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4436 Psa-Chr4 394163965 394166408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4436 1 146 Response Regulator Gene Family AT2G41310 68.182 9.52e-75 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa4g4436 Response_reg 2.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4436 K14492 - gmx:100787436 244.588