Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4404 ATGAGCTCCTTGCAAGTCCTCTCCACCACTACCATACATGCACCAAATCACCCAAATCATCATACAATCCATCTAACTCCATGGGATCTTCAATTCCTCCCATTTGAATACAATCAATTTGGTTATCTTTACCACCACCCTACCAACTTAGATGTATCTAACCAAATCGAGCACCTTAAAAACTCCTTCACCTCTACCTTACATTTACTCCATCCCCTCACCGGTCGTCTCAAAATCACACACCATGAAGATAACACTATCTCCTGTTCTATCAACTGCAACAACGACGGTGCACTCTTTGTTCATGCGGTGGCTGAAAATATCACCGTCGCTGATATTTTTAAAGTCGCTAAAGTTACTCCTATTCATCACTCGTTTTACGCAATGAATGGATTTAAAAACTACAATGGCACATCACAACCATTACTCGCTGTTCAAGTTACAGAGTTAGTCGATGGCATCTTCATTGGCTGTACTATCAACCATGTGACTGGTGATGGTAATTTGTTCGCCTATTTTATCAATTCTTGGGCGAGATTCTCGAAAGGTTGCGTTAAAATGTCCACACTTCCGATATTTGAACGGTGGTTTCCGAAAGGTATTGAATGTCCGATTCGATTTCCTTTTAAAATAGAACAACAAAGTAATCTTGAAGAAAAGAAACTCAACCCATCAGAGAGAATATTTCATTTCACAAAAGAGAATATTGCCAAACTGAAATTCAAAGCCAACTTAGAGGCTGGTACAACGAATATATCTTCTTTGCAAGCACTTTTCACTCACCTTTGGCGTTCTTTTATACGTTCCAAAGAACTTGACCCACAAACAGACGTTAAATTTGTGTTGGATATAGGTGTTAAAAAGAGATTGGTTCCTCAGTTGCCGGAGAATTATTATGGTGTTGCTGTGATAGAATGTGTGGTTTCCATGAAAGCCGGTGAGTTGTTGGGAGATGGCGGGCTTGGGAAAGGTGCATTGGAAATGAATAAGATAATTGCTTTGCACAATGATGAGAAGTTGAGAAGTGAGTATAAGAATTGGCTAACGAAACCGAGTTTTACTATTACGCGTGATGATGCGGGGAATGTTAATTCATTGGTCATTGGAAGTTCACCCTGGTTTGAGTTTTATGAGAGTGATTTTGGATGGGGAAAACCTGTGGGGGTTCGAAGTGGGTATGAGAGTAAAAGAAATGGAAAAGTTTATGTGTATGGATGTGTAGAAAAAGGTAACATGGAGCTTGAAGTGTGTCAACCTTATGAAATTTTGGTGGCAATGGGAAATGATCCTGAGTTTATGATGGAGCTTTCTTAG 1314 0.3973 MSSLQVLSTTTIHAPNHPNHHTIHLTPWDLQFLPFEYNQFGYLYHHPTNLDVSNQIEHLKNSFTSTLHLLHPLTGRLKITHHEDNTISCSINCNNDGALFVHAVAENITVADIFKVAKVTPIHHSFYAMNGFKNYNGTSQPLLAVQVTELVDGIFIGCTINHVTGDGNLFAYFINSWARFSKGCVKMSTLPIFERWFPKGIECPIRFPFKIEQQSNLEEKKLNPSERIFHFTKENIAKLKFKANLEAGTTNISSLQALFTHLWRSFIRSKELDPQTDVKFVLDIGVKKRLVPQLPENYYGVAVIECVVSMKAGELLGDGGLGKGALEMNKIIALHNDEKLRSEYKNWLTKPSFTITRDDAGNVNSLVIGSSPWFEFYESDFGWGKPVGVRSGYESKRNGKVYVYGCVEKGNMELEVCQPYEILVAMGNDPEFMMELS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4404 437 Pfam Transferase family 4 433 - -
Psa4g4404 437 Gene3D - 210 426 IPR023213 -
Psa4g4404 437 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 433 - -
Psa4g4404 437 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 433 - -
Psa4g4404 437 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4404 Psa-Chr4 391115084 391119526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4404 44 392 Monolignol Biosynthesis Gene Families AT5G48930 26.243 4.90e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4404 - - gmx:100500257 436.417