Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4403 ATGAGTTTCGTCCGAGTCATTTCCGCCACTACAATCAATTCTCCAAATCACAATCTCAATTTCTCAAAAGATCATACAATCGATCTAACACCATGGGATCTTCAATATCTCCCATTTGGATACAATCAAATCGGTCTTATTTATCACAACTCTTCTGAATCAGATACAAACACTAAAATCCAACACCTTAAACACTCTCTATCCTCTACCCTTGAATTTTTTCCACCTTTCACGGGCCGTCTCAATATCACGGAACATGAAGATAACACTATCTCTTGTTCCATCAGGTGTAACAATGAAGGTGCACTCTTTGTTCATGCTGCAGCTAAAAATCTCAGCGTCGGCGATATTCTTGAACCAATTTATCTTCCTGACATTTTTTATTCATTTTTTCAACTTAATGGAGTTAAAAACTACGAAGGGACGTCACAACCATTACTTGCTGTCCAAGTGACGGAGTTTGCCGACGGTATTGTCATTGGCTGCTCAATCAGTCATGTGGTAGTCGATGGTACTTCACTTTGGCATTTCATCAATTCTTGGGCCGGAATCTCACAGGGTAATTTTGAAATTTCCAAAATTTCATCGTTTGAAAGATGGTTTCCAACCGGTATTCAATGTCCGATTAGATTTCATTTCTCAATTAATCTCTATAGTAATCAAAATGATGAAGAAGAAAAACTCAACACACAGATGTCAGAGAGATTATTTCATTTCTCTAAAGAGAATATTGCAAAACTAAAATCGAAAGCCAATTTAGAGGCGGGGTCAAAGAACATATCTTCCTTACAAGCAGTTTTCACTCAAGTTTGGCGCTCTATTATACGTTCCAAAAACCTTGATCCGCAAGAAGAACTAAATTTCGTGATGGATATAGGCGTTAGACCAAGGTTTATTCCTCCGTTGCAAGAGAAGTATTTTGGTAATGCTGTGATGGAATGTGTAGTTACCATGAAAGCCGGTGAATTGTTGGAAGATGATGGACTTGGAAAATGTGCTTTGAAGATGAACAAGATGATTGCTCTGCACTCTGACGAGAAGTTAAAGAATCACTACAAAGATTGGTTAATTGCACCGAGTTTTGTTTTTAACGACCGTGGTGTGGCAAATAGTAATTCAATGGCGATCGGTGGTTCTCCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAGCCTGTGGCGGTACGAAATGGGGGTGCAAATAAAAGAAATGGAAAGATTTATGTGTCTGCTGGTGTTGAAGAAGGTAGTATAAATCTTGAAGTTTGTCTTCCTTATGAAATTTTGGAGGCAATTGGAAATGATTCTGAGTTTATGGATATTGTGTCTAGCTAA 1341 0.3818 MSFVRVISATTINSPNHNLNFSKDHTIDLTPWDLQYLPFGYNQIGLIYHNSSESDTNTKIQHLKHSLSSTLEFFPPFTGRLNITEHEDNTISCSIRCNNEGALFVHAAAKNLSVGDILEPIYLPDIFYSFFQLNGVKNYEGTSQPLLAVQVTEFADGIVIGCSISHVVVDGTSLWHFINSWAGISQGNFEISKISSFERWFPTGIQCPIRFHFSINLYSNQNDEEEKLNTQMSERLFHFSKENIAKLKSKANLEAGSKNISSLQAVFTQVWRSIIRSKNLDPQEELNFVMDIGVRPRFIPPLQEKYFGNAVMECVVTMKAGELLEDDGLGKCALKMNKMIALHSDEKLKNHYKDWLIAPSFVFNDRGVANSNSMAIGGSPWFDVYGNDFGWGKPVAVRNGGANKRNGKIYVSAGVEEGSINLEVCLPYEILEAIGNDSEFMDIVSS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4403 446 Gene3D - 215 435 IPR023213 -
Psa4g4403 446 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 443 - -
Psa4g4403 446 Gene3D - 3 207 IPR023213 -
Psa4g4403 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 443 - -
Psa4g4403 446 Pfam Transferase family 22 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4403 Psa-Chr4 390545963 390547648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4403 61 429 Monolignol Biosynthesis Gene Families AT5G48930 25.260 1.35e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4403 - - gmx:100500257 491.5