Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4398 ATGAGTTCTGTCCAAATCCTCTCCACCACTACAATCCATGCACCAAATCACTTCAATGATCATACTATCCATCTAACACCATGGGATCTACAATTTCTCCCATTTGGATACAATCAAACTGGTCTTCTTTATCACCAACCTTTTGAGTTAGATTCAACTAATCAAATCCAACACTTTAAAAATTCTCTTTCCTCTACCCTCGATTTCTTCCATCTCTTCACGGGCCGTCTCAAAATCACACAACACGACGATAACACTATCTCATGTTCTATCAAGTGCAACAACGAAGGAGCACTGTTGGTTCATGCTGCAGCGAAACATATTAGTGTCTCCGACATTCTTGAACCCAAATATATTCCCCCTATTCATCATTCATTATTTTCACTTAATGGAGTTAAAAATTATGAAGGGACATCACAGCCATTACTTGCTGTCCAAGTAACAGAATTAGTCGACGGCGTCTTTGTTGGCTTCACACTCAACCATGTGGTTGGTGATGGTAAATCGTTTTGCCATTTTTCTAATTCGTTGGCAGAAATCTCAAAAGGTTGTGTTAAAATATCCAAACTTCCAATATATGAACGTTGGTTTCCAAAAGATACTCCATGTCCCATTCGATTTCCCTTCACAATAGAACCGCAAAATAATTACTCTAATAATGGAGGTAGAAAACTCAACCTGCCAGAAAGATTATTTCATTTGACAAAAGAGAATATTGCTAAACTAAAATTCAAAGCCAACTTAGAAGCTGGGACGACGAAGTTATCTTCTTTGCAAGCACTTTTGACTCATATTTGGCGTTCTTTTATACGTTCTAGAAAACTTGACCCACAAACAGAAGTGAGTTTTGTGTTGGATATAGGCGTTAGACCAAGGCTGATTCCGCCTTTGCATGATGATTATTTTGGTACTGCTGTGATAGATTTTGCGGTTACCATGAAAGCTGGTGAATTGTTAGAAGATGGTGGACTTGGTAAAGGTGCATTGAAGATGAACAAGATGATTGCTTTGCACTCGAACGAGAAGTTGAAAAGTGACTATAAAAATTGGTTGATAACACCGAATTTTATTAAAAACTCTGATGATGCTGTCAATAATAATTCATTGGTGATTGGGAGTTCTCCTTGGTTTGACGTTTATGTTAATGATTTTGGTTGGGGAAAACCTGTGGGGGTTCGAAGTGGGAGTTCAAATAAAAGAAATGGGAAAGTTTATGTGTATGCAGGTGTAGAAAAAGGTAGTATGGACCTTGAAATTTGTCTTCCGTATGAAAATTTGGAGGCAATTGGGAATGATCCTGAGTTTATGAATCATGCATCCCACTACCGTGGCTTCTAA 1338 0.3804 MSSVQILSTTTIHAPNHFNDHTIHLTPWDLQFLPFGYNQTGLLYHQPFELDSTNQIQHFKNSLSSTLDFFHLFTGRLKITQHDDNTISCSIKCNNEGALLVHAAAKHISVSDILEPKYIPPIHHSLFSLNGVKNYEGTSQPLLAVQVTELVDGVFVGFTLNHVVGDGKSFCHFSNSLAEISKGCVKISKLPIYERWFPKDTPCPIRFPFTIEPQNNYSNNGGRKLNLPERLFHLTKENIAKLKFKANLEAGTTKLSSLQALLTHIWRSFIRSRKLDPQTEVSFVLDIGVRPRLIPPLHDDYFGTAVIDFAVTMKAGELLEDGGLGKGALKMNKMIALHSNEKLKSDYKNWLITPNFIKNSDDAVNNNSLVIGSSPWFDVYVNDFGWGKPVGVRSGSSNKRNGKVYVYAGVEKGSMDLEICLPYENLEAIGNDPEFMNHASHYRGF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4398 445 Pfam Transferase family 3 436 - -
Psa4g4398 445 Gene3D - 226 431 IPR023213 -
Psa4g4398 445 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 438 - -
Psa4g4398 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 438 - -
Psa4g4398 445 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4398 Psa-Chr4 389718650 389721332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4398 37 427 Monolignol Biosynthesis Gene Families AT5G48930 24.816 1.18e-23 100