Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4396 ATGGGCATTCCTTGCTATAAAGCACCTGAACTTTTGATGGGTTCTACCCGTTATTCAACTGCAGTTGATATCTGGTCGATGGGCTGCATATTTGCTGAGATGTTTAAGCTCAAACCCCTGTTCGTCGGTGTAGACGAAGTAGAGATGTTGGCTGAGATATTTTGTTTGCTTGGTGCGCCAACAGAAGAATCCTGGCCTGGTGTGTCTTCTATATGCGCCTTTATTGAACATCTTGTTGATCCTTCAATCATGCCAAAGGACCTAGCATTAGAGTTCCCAAAACTCGATCCTGCTGCTCTTGATCTTCTTTCGAAAATGCTTTGTCTGTGCCCAAATGGCAGGATTTCAGCTTATGAAGCTCTTGACCATCCATATCTTCAAGATTGA 387 0.4367 MGIPCYKAPELLMGSTRYSTAVDIWSMGCIFAEMFKLKPLFVGVDEVEMLAEIFCLLGAPTEESWPGVSSICAFIEHLVDPSIMPKDLALEFPKLDPAALDLLSKMLCLCPNGRISAYEALDHPYLQD* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4396 128 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4396 128 PANTHER CELL DIVISION PROTEIN KINASE 6 127 - -
Psa4g4396 128 Pfam Protein kinase domain 4 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4396 128 Gene3D Transferase(Phosphotransferase) domain 1 4 127 - -
Psa4g4396 128 SUPERFAMILY Protein kinase-like (PK-like) 4 128 IPR011009 -
Psa4g4396 128 PANTHER CYCLIN-DEPENDENT KINASE 10 6 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4396 Psa-Chr4 389689033 389690347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4396 6 126 Core Cell Cycle Gene Families AT3G54180 54.545 1.63e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Psa4g4396 Pkinase 1.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4396 K02206 - gmx:100804719 148.288