Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4376 ATGGACACTACTTGGATTTTGTTTGCGACACCAATTTTCCTGTGCACTTTGATCCTCTACTACAGAAACAGGCTTAGTCTTAAGCTCAAATCAAAACACGGAAATCAGCTTCCACTAGGCTCTCTTGGATGGCCTTTTATTGGTGAAACCATAGATTTTGTTTCTTGTGCTTACACCGATCGGCCTGAAAGCTTCATGACCAAGCGACGCACCATGTATGGTAAGGTGTTCAAGTCACACATATTTGGAAGCCCAACCATTGTTTCAACAGATGCAGATGTGAACAAGTTCATACTACAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCTAAGTCATTGATGAAGTTAATGGGAGAATCTTCTATTTTGCTCATCAATGGAACCTTACAAAGGAGAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGTTAAAGATTCAGATTACCACAGATATGGAGAAATATGTTCAAGAATCAATGGCAAATTGGAAAGAGGACCAGCCTATATACATACAAGATGAAACAAAAAAGATTGCATTTCATGTACTAGTCAAGGCATTGATTAGTTTGGATCCCGGTGAAGAAATGGAGTTTCTAATAAAACATTTTAAGGAATTTATATCTGGCCTCATGTCTTTGCCAATAAGCCTACCAGGAACAAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGCGAAATTAGTGAGAAAAACTATCGAAGCTAGAAGAAATAAAGGTGTCACGGAAGTTCCAAAAGATGTAGTAGATGTGCTTCTTAATGATACAAGTGAGAAATTGACTGATGATTTAATAGCCGATAATATTATTGATATGATGATTCCCGGAGAGGACTCAGTTCCAATTCTTATGACTCTAGCTACTAAGTACCTATCAGAATGCCCCGATGCTTTGCAACAATTGACGGAGGAAAATATAAAGATTAAGAAACTCAAAGATCAGCTTGAGGAGCCATTGTGTTGGAGTGATTACTTATCATTGCCATTTACTCAAAAAATTATAACAGAAACTTTGAGGATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATATAATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGACTGTCCATATCAATTCAATCCATGGAGGTGGCAAGAAAAAGACATGAACTTGAACAGTAACAATTTCAGTCCTTTTGGAGGGGGACAAAGGCTGTGTCCTGGTATTGACTTGGCCAGGCTAGAAGCTTCCATCTATCTACATCACCTTGTTACTCAATTTAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCAACAGTAAGAATGAAAAGAAGGATGCCCGTCTTGGTAAAAAGAGTGGAAATTTAA 1431 0.3697 MDTTWILFATPIFLCTLILYYRNRLSLKLKSKHGNQLPLGSLGWPFIGETIDFVSCAYTDRPESFMTKRRTMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLMKLMGESSILLINGTLQRRIHGLIGAFFKSQQLKIQITTDMEKYVQESMANWKEDQPIYIQDETKKIAFHVLVKALISLDPGEEMEFLIKHFKEFISGLMSLPISLPGTKLYQSLQAKKKMAKLVRKTIEARRNKGVTEVPKDVVDVLLNDTSEKLTDDLIADNIIDMMIPGEDSVPILMTLATKYLSECPDALQQLTEENIKIKKLKDQLEEPLCWSDYLSLPFTQKIITETLRMGNIINGVMRKALKDVEIKGYIIPQGWCVFANFRSVHLDEKNYDCPYQFNPWRWQEKDMNLNSNNFSPFGGGQRLCPGIDLARLEASIYLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPVLVKRVEI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4376 476 PANTHER CYTOCHROME P450 26 27 469 - -
Psa4g4376 476 SUPERFAMILY Cytochrome P450 33 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Psa4g4376 476 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 Gene3D Cytochrome P450 28 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 27 469 - -
Psa4g4376 476 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4376 476 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4376 Psa-Chr4 386850960 386853494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4376 33 447 Cytochrome P450 AT3G13730 66.667 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4376 K12638 - gmx:100797868 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4376 4 386850960 386853494 Psa4g4376 4 386850960 386853494 ECH