Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4363 ATGGGACTTTTGCTAATTTTGCTGCTAATTAAGCTGCATTTTGGCCTCAGTATTCAACAGGTTCATGAATATTCAGACACCAACCTACCACATTTCAGATTCAGTGGTCATTTAAGTATTGCAGTCCCACCTTCTTATGTTTCTTCCAGTATTGCACAACCACCTGCCAAGTCATCGCCGGGCGTTCCTGCAAGTATTGCACTTCCACCTTACAAGTCAACTGCCAGAGCTCCTACAAAGAAACAGAAACATGGTTCTTTGGATTCTCCAATATCACATCATAAGCATCACTATTCCGGAAAAAAGAACCGCAATCCAACTCTAGGACCGACCTCCACAATCCAAGCGCCTACTTACAGCAATCAAGGCCCTTCATTTCTCAAACCACAGCCTCCTTTCTCTTCACCAAAGAGCAAGTTTATCCATGCACCTGTTCCTGCACCATCACCAGCATTTCGGTCAGGACATCTAGATGTTCCGTCTCTTCCGCCAAGAATTTCACCTATAGGTTCATCATTGAACAAGATTAAGACTCCGCCGCCAGCATATGCATTAGTTCTTCCCCCTCCCCCTCCTAATAAAGATTGCTTATCCGTTACTTGCTCAGAGCCGTTGACATACACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAAATCCGTGTCAGCATTGCTACATACAAGTGTTTTCCTCTGGTTTCAAAGCTAGCTGATGAAATTGCAGCGAGTGCTATGCTGAACCATACACAAGTTCGTATTGTGGGAGCTGATGCAGCTAATCAACAACTAGAGAAAACCAATATTATCATTAACCTGGTACCAAAAGGAGTAAAATTTGATGATACCGCAGCATTATTAATATACAGGAAATTCTGGCACAGGGAGATTCTAATAGATGATTCCCTCTTTGGTACTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAATTCCCTCGGGTGTTTCTAATGTAGATGATGGACCGAATCAAGGTCATGACAACAATGGAATGATGATGAAACCTTTAGGAGTAGCTATACCAAAGAAAAAGAAAGAAGGGAGCAATGGAAGAATGATTTTTATAATTGTGCTGTCATCAGTTACTGTTTTTGTACTATTCCTTGGACTTGCTTGGCTTTGTCTGTTGAAATACAGTTCTTGTATTCATCAACACGAAAAAGCTTCAGATAGCTTAATGTCATCCTCTTCAAAACATTTAAGGGCTGCCGGGCCATTAAATCATGGGATCATGTCAGGATCTGGATCACGTTCCTTCGGTTCAGGGACAATAGCATTTACAAGATCTGCCAAGAATTTTTCCTTGAATGACTTGGAGAAAGCAACAAATAACTTTGACTCTTCTAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTGTTCTGAATGATGGGAGGGATGTAGCAGTAAAAATTCTCAAAAGAGATGATCAGCGTGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTGGCCGCCTTCACCATAGAAATTTAGTTAAACTGATAGGTATATGCATAGAGAAAAAGACTCGTTGCCTGGTGTATGAACTTGTCCCTAATGGAAGTGTGGAATCCCATTTGCATGGTGCTGACAAGGAAAGTGATCCATTGAATTGGAGCGCCCGGGTGAAGATTGCTCTTGCTCCTGAATATGCAATGACTGGCCATCTTCTCGTCAAAAGTGATGTTTACAGTTATGGAGTTGTGCTCCTTGAGCTCCTAACCGGTAGAAAGCCTGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACTTGGGTTCGTCCACTTCTCACAAGTAACGAAGGTTTGCAAACAATTATAGACCCAGATGTAAAGCCAAATGTATCGATCGATACAGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTATCTCAGCGACCTTTCATGGGAGAAGTTGTTCAAGCCTTGCAGCTTGTATGCAGTGAGTTTGAAGAAACAAACTGTATAAAATCAAGTAACATTCACGAAGACGATCTTGCAATAACTAATCTGGAAGGGAAGTTTATGGAAGTTTCAAATGAGAGAGTGGAGTCTTCGGAGTGTCAAAAAACACTGTATGGCTATCAATCTGGTGAAGAAAATGTAAGATTATCAGCTTCAGAGCTGCTCAGTACTTCAGGCCGGGAATTTGAGTCATTCAGGAGGAAATCAACTTCGGGGCCTCTTACCACCGAGAAAAAAAGACATTTCTGGCAAAATTTGAGAGGTTTGTCTAAAGGTAGCAGCACAAAAGATCATGGATTTTCATCTAAACTATGGCCAGGAGGATCCCATTAA 2376 0.4196 MGLLLILLLIKLHFGLSIQQVHEYSDTNLPHFRFSGHLSIAVPPSYVSSSIAQPPAKSSPGVPASIALPPYKSTARAPTKKQKHGSLDSPISHHKHHYSGKKNRNPTLGPTSTIQAPTYSNQGPSFLKPQPPFSSPKSKFIHAPVPAPSPAFRSGHLDVPSLPPRISPIGSSLNKIKTPPPAYALVLPPPPPNKDCLSVTCSEPLTYTPPGSPCGCVWPLQVKIRVSIATYKCFPLVSKLADEIAASAMLNHTQVRIVGADAANQQLEKTNIIINLVPKGVKFDDTAALLIYRKFWHREILIDDSLFGTYEVLYVHYPGLPPSPPSIPSGVSNVDDGPNQGHDNNGMMMKPLGVAIPKKKKEGSNGRMIFIIVLSSVTVFVLFLGLAWLCLLKYSSCIHQHEKASDSLMSSSSKHLRAAGPLNHGIMSGSGSRSFGSGTIAFTRSAKNFSLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDVAVKILKRDDQRGGREFLAEVEMLGRLHHRNLVKLIGICIEKKTRCLVYELVPNGSVESHLHGADKESDPLNWSARVKIALAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSNEGLQTIIDPDVKPNVSIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEETNCIKSSNIHEDDLAITNLEGKFMEVSNERVESSECQKTLYGYQSGEENVRLSASELLSTSGREFESFRRKSTSGPLTTEKKRHFWQNLRGLSKGSSTKDHGFSSKLWPGGSH* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4363 791 ProSiteProfiles Protein kinase domain profile. 461 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4363 791 PANTHER OS01G0750732 PROTEIN 21 566 - -
Psa4g4363 791 PANTHER OS01G0750732 PROTEIN 566 788 - -
Psa4g4363 791 Pfam Protein tyrosine and serine/threonine kinase 566 669 IPR001245 GO:0004672|GO:0006468
Psa4g4363 791 Pfam Protein tyrosine and serine/threonine kinase 464 553 IPR001245 GO:0004672|GO:0006468
Psa4g4363 791 PANTHER OS01G0750732 PROTEIN 21 566 - -
Psa4g4363 791 PANTHER OS01G0750732 PROTEIN 566 788 - -
Psa4g4363 791 Gene3D Transferase(Phosphotransferase) domain 1 565 693 - -
Psa4g4363 791 SUPERFAMILY Protein kinase-like (PK-like) 447 670 IPR011009 -
Psa4g4363 791 MobiDBLite consensus disorder prediction 73 107 - -
Psa4g4363 791 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Psa4g4363 791 Gene3D Phosphorylase Kinase; domain 1 438 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4363 Psa-Chr4 385026402 385030943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4363 503 791 Receptor kinase-like Gene Family AT5G56890 47.279 2.51e-63 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa4g4363 PK_Tyr_Ser-Thr 5.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4363 - - gmx:100814040 800.431