Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4351 AAAATAGTTATAAATTCAAAGGAGAGGACACAATGTATTTTTTTACGCCAAGAAGTAAGAAGTATGAAAATGGACAACGTCCAGATCGAGCAGTTGAAAATCATGGTTTTTGGAAAGCTACTGGAAAAGAAAATTCAGTGATGAAGAATGATGTTGAAATTGGATTCAAAAGAAGTTTAGTGTTTTACACGGGTAAACAAGGAAAGGCTAAAGAGTTAGTGAATTTGAAGACCAATTGGATTATGCAAGAGTTCAGAATCAAAGATTTTACAATTTCTGGTGCAACTCTTTATAATAATAATAAG 305 0.318 NSYKFKGEDTMYFFTPRSKKYENGQRPDRAVENHGFWKATGKENSVMKNDVEIGFKRSLVFYTGKQGKAKELVNLKTNWIMQEFRIKDFTISGATLYNNNK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4351 101 ProSiteProfiles NAC domain profile. 1 101 IPR003441 GO:0003677|GO:0006355
Psa4g4351 101 Pfam No apical meristem (NAM) protein 6 86 IPR003441 GO:0003677|GO:0006355
Psa4g4351 101 SUPERFAMILY NAC domain 5 89 IPR036093 GO:0003677|GO:0006355
Psa4g4351 101 Gene3D NAC domain 1 100 IPR036093 GO:0003677|GO:0006355
Psa4g4351 101 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 6 91 - -
Psa4g4351 101 PANTHER NAC TRANSCRIPTION FACTOR 56 6 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4351 Psa-Chr4 383177014 383177318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4351 7 88 NAC Transcription Factor Family AT1G69490 45.122 2.25e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa4g4351 NAM 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4351 - - cam:101498998 129.798