Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4340 ATGGGATCGTGTCTCTCAGGAGCTTCTTCAGCTCATTCTCCTCATAATGATTCTTCTACTTCTTCATCTCGTAACTATTCTCGTGATTCGAGTGCGGAAATGCGGTTGCATAGAGTTCCTGGAAGAGTTTTCTTGAATGGTTCATCTCCTTTTGCATCGTTGTTTTGTAGACAAGGTGCAAAGGGTGTAAATCAGGATGCAATGCTTCTTTGGGAGACGTTTGGTGCTATGGAGGATACTGTATTTTGCGGCGTGTTTGATGGACATGGACCACACGGACACGTGGTTGCGAAGAAAGTTAGAGATTGTTTTCCTTTAAAGATAATGGAGGAATGGATTTCGCGTCGCCGTGACGATGATAATGATGGTAAAACTAATAACAATAACAAGGATGATATTTTGAAGATGATGAGAGAATTGTTTTTGATGGCGTCTAAGTTTGTGGACAAAGAACTCAAACTTCATTATGCCATGGAATCTTATGGAAGTGGGACTACAGCTGTTACGTTGATCAAGAAGGGCCAAGAACTAGTAATTGCAAATGTTGGAGACTCTAGAGCTGTTTTAGCAACCCTAGATTCAAATGGTTCTCTTAAAGCACATCAGTTAACAACCGATCTCAAGCCAAATCTTCCGAGGGAATTAGAAAGAATAAGAATTTGCAAAGGAAGGGTTTTCGCTCTCAACTCTGAATCAGATGTTGCTAGACTTTGGCTACCGAAAGTCGATTCCCCCGGCCTTGCCATGTCTCGTGCTTTCGGCGACTTTTGCCTCAAGAACTTTGGACTCATATCTGTCCCTGAAGTTGCCTATCATCGCCTCAATAACGAAGACCAGTTTGTTGTCTTGGCCACAGATGGAATTTGGGATGTTTTGTCTAACAAAGAAGTTGTCAACATTGTGGCATCTACTCCACGAGCTTCTGCGGCTAAACAACTTGTTGAATCGGCTGTTCAAGCATGGAAGACCAAGCTTTCAACTTCTAAGCTTGATGATTGTTCTGCAGTTTGTCTCTTCTTTCATTCAAACACCAACGTTGTGGGAGAGAAAGGGACAAAAGAATCACGTGGAAAATCTAAACAAAAGCATCAATAG 1095 0.4201 MGSCLSGASSAHSPHNDSSTSSSRNYSRDSSAEMRLHRVPGRVFLNGSSPFASLFCRQGAKGVNQDAMLLWETFGAMEDTVFCGVFDGHGPHGHVVAKKVRDCFPLKIMEEWISRRRDDDNDGKTNNNNKDDILKMMRELFLMASKFVDKELKLHYAMESYGSGTTAVTLIKKGQELVIANVGDSRAVLATLDSNGSLKAHQLTTDLKPNLPRELERIRICKGRVFALNSESDVARLWLPKVDSPGLAMSRAFGDFCLKNFGLISVPEVAYHRLNNEDQFVVLATDGIWDVLSNKEVVNIVASTPRASAAKQLVESAVQAWKTKLSTSKLDDCSAVCLFFHSNTNVVGEKGTKESRGKSKQKHQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4340 364 SMART PP2C_4 40 338 IPR001932 -
Psa4g4340 364 Gene3D - 48 343 IPR036457 -
Psa4g4340 364 SUPERFAMILY PP2C-like 47 341 IPR036457 -
Psa4g4340 364 MobiDBLite consensus disorder prediction 1 32 - -
Psa4g4340 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 347 - -
Psa4g4340 364 CDD PP2Cc 51 340 IPR001932 -
Psa4g4340 364 Pfam Protein phosphatase 2C 65 317 IPR001932 -
Psa4g4340 364 ProSiteProfiles PPM-type phosphatase domain profile. 51 340 IPR001932 -
Psa4g4340 364 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 347 - -
Psa4g4340 364 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4340 Psa-Chr4 382668146 382670512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4340 1 347 PP2C-type Phosphatase Gene Family AT3G02750 46.101 4.47e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4340 - - cam:101504803 483.796