Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4319 ATGCTGATATTAGTTCTAGGAATAGTTTCAGCTACTTTGCTAGTGATTGTTGCAATTTATGGCTTATGTTACTTGAAAAGATTTTCAAAGCATGAGATTAAAGACATAGAAAGCTTAGAAGAAAAGCATGAAGAGGTGAAGGAGGATTTAATCATATTTGAAGGTGGAGAAGATTTGACAATTTGTGATATATTGGATGCACCAGGGGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTGCAAAGGAGCAGCAAGGTTAGGTTATTGAGGTTTTTGAGACCTGTTTGTACTACAACAGGTGAAGAATTGGATGAAATGATTGTGTTTCTTGGAAGATTAAAGCATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCAAGAGGTGAGAAGCTTCTTGTTCATCCATTTTACAGACATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGACAAACATATATACAATATCAATTGGTATAGCAAAAGGACTAGAACATCTTCATACATCACAAGAAAAACCGATTATCCATGGAAACCTAAAATCGAAAAACATCCTTTTAGACAGTTCCTATCAACCACACATCTCAGATTCAGGTCTCCATCTTCTGTTGAATCCAACTGCTGCCCAAGAAATGCTTGAAAGTTCGTCTGCTCAAGGCTATAAAGCTCCCGAACTAATCAAAATGAAGGATGCTAGTGAAGAAACCGATATCTATAGCCTCGGCGTAATCTTGCTTGAATTGCTTTCGGGAAAGGAACCTATCAATGAACATCCGACTCCTGATGAGGATTTCTATTTGCCGAATTTCATGAGAAATGCTGTTCTTGGACACAGAATTTCTGATTTATATCATCCTGCTATTCTTCTCAGAAACGGCGTAGATGATGAAATTCAAGTTACGGAAGAATGCGTTCTCAAGTTTTTTCAACTTGCTATGGCTTGTTGTTCGCCTTCGCCTTCAATTAGACCTAACATTAAGCAAGTTATTAGGAAGCTTGAAGAAATTATACACTAG 1056 0.3684 MLILVLGIVSATLLVIVAIYGLCYLKRFSKHEIKDIESLEEKHEEVKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSSKVRLLRFLRPVCTTTGEELDEMIVFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWTNIYTISIGIAKGLEHLHTSQEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTAAQEMLESSSAQGYKAPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGVDDEIQVTEECVLKFFQLAMACCSPSPSIRPNIKQVIRKLEEIIH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4319 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Psa4g4319 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 349 - -
Psa4g4319 351 Coils Coil 29 49 - -
Psa4g4319 351 SUPERFAMILY Protein kinase-like (PK-like) 69 348 IPR011009 -
Psa4g4319 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Psa4g4319 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4319 351 Gene3D Phosphorylase Kinase; domain 1 67 143 - -
Psa4g4319 351 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4319 Psa-Chr4 381316274 381319199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4319 35 349 Carbohydrate Esterase AT5G61570 61.538 3.45e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa4g4319 PK_Tyr_Ser-Thr 1.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4319 - - gmx:100788898 593.578