Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4317 ATGGACTTATTACTAAATTCCACCCTTTCCTACTTGGTAATTTTCACATTCTCTTTCCTTCTCCTTCTCAAATTTCTCATTCCAACCAAAAAAACCAACCAAAAAAACCACTCCAAGCTTCCTCCTGGTCCTACACCACTTCCCATAATAGGAAACCTTCTAAAACTAGGAAACAAACCACATCATTCCTTAGCAAATCTTTCCAACATCCATGGTCCAATTATGACACTAAAACTGGGACAAATAACGACCATAGTAGTATCCTCAGCAGACATAGCAAAAGAAGTTCTACAAACACATGACAATCTACTCTCAAACCGAACCGTCCCGGACGCGCTCTCCGTCCTCAACCACGATCAATATAGTCTCTCTTTCATGCGCGTTTCGCCTCGCTGGCGTGACCTTAGAAAGATTTGTAACAACCAGTTGTTTTCGAATAAGACGCTGGATTCGAGCCAGCCGCTTAGGCGGAGGAAACTACAGAACCTGTTAGATGATATCAGAAAGTGTAGCGAAGCTGAGGAAGCTGTGGATATTGGGAGAGTTGCTTTTATGACAACCATTAATTTGTTGTCGAATACTTTTTTCTCGGCCGACTTTGTTCATTCGGCCGAGGAAGCTGGAGAGTATAAGGAGATTGTTGTGAGTATATTGAAGGAAGTTGGAGTGCCGAATTTGTCGGACTTTTTTCCTATGTTGAAGGTTTTTGATTTGCAGGGTATTAGGAGACGTTCTGTTGTTTCTGTAAGGAAGGTTTTGAGTATTTTTAGGAGATTTGTTGGGGAAAGGTTGAAGATGAGAGAAGGTACTGGTTCTATTGGAAATGATGATGTGCTTGATGCTTTGCTTAATATTTCTTTGGACGATGGGAAAATTGAGATGGATAAAGACGAGATAGAACATTTGTTGCTGAACATATTTGTTGCAGGAACAGACACAAGCACATACACACTAGAATGGGCAATGGCAGAGTTAATGCACAATCCAGAAATCATGTCAAAAGTTCAAAACGAACTCGAACAAGTTGTTGGCAAAGGTAATCCAATTGAAGAAACAGACGTAGCCAAATTACCCTACATGCAAGCAGTTATAAAAGAGACATTTCGCGTGCATCCGCCAGTTCCCTTATTGCTGCCTCGTAAAGCCGAAACAGATGTCGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGCCATCAGCAGAGACCCAAGTAAATGGGAAAATCCTAATGTTTTTGCGCCGGAGAGGTTTTTGGATAGTGAAATTGATTTTAAAGGACATCATTTTGAGCTTATTCCGTTCGGGTCTGGTCGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGATGCCTTTGATGTTGGGGTCTTTGGTTAATTGCTTTAATTGGAGACTCGAAGATGGATTGAGTGCTGAAGATTTGAATAAGGAAGATGAGTATGGGATTACTTTGGAAAAATCTCAACCGGTCAGAATTGTTCCAATCAAATTGACTAAGTAA 1524 0.4062 MDLLLNSTLSYLVIFTFSFLLLLKFLIPTKKTNQKNHSKLPPGPTPLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKLGQITTIVVSSADIAKEVLQTHDNLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFSNKTLDSSQPLRRRKLQNLLDDIRKCSEAEEAVDIGRVAFMTTINLLSNTFFSADFVHSAEEAGEYKEIVVSILKEVGVPNLSDFFPMLKVFDLQGIRRRSVVSVRKVLSIFRRFVGERLKMREGTGSIGNDDVLDALLNISLDDGKIEMDKDEIEHLLLNIFVAGTDTSTYTLEWAMAELMHNPEIMSKVQNELEQVVGKGNPIEETDVAKLPYMQAVIKETFRVHPPVPLLLPRKAETDVEIGDYIIPKDAQVLVNAWAISRDPSKWENPNVFAPERFLDSEIDFKGHHFELIPFGSGRRICPGLPLAIRMMPLMLGSLVNCFNWRLEDGLSAEDLNKEDEYGITLEKSQPVRIVPIKLTK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4317 507 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 506 - -
Psa4g4317 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Psa4g4317 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 506 - -
Psa4g4317 507 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g4317 507 Pfam Cytochrome P450 41 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4317 Psa-Chr4 380725897 380728275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4317 1 504 Cytochrome P450 AT2G45550 43.359 2.13e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4317 - K23810 gmx:100805772 583.948