Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4299 ATGGGAACCGAATTCGCCATCAAAACACTTTGCAGAAGCATCTCAGCTGACGAGTTTAAGCAAAGAAGAAACTTGTTGGCCTCTCCCGCGGAAGAAAACTTTCTAAACCATAACACTCCACTTATCAACGATGCTGCTTCCAAGCAGGGTCCATGTTGGTCTCAGCTCAAGTTCGCCGGTATGCTGCAGTGGGGCCAACGCAGGCAAGTTCGCTTCCTCGGCCGTCATGACGAGCAAAACGTTGAATCTTTACCTGAGCTTCAAATGCCCGTTTTTGAATCCAGAGAAAGGACTTATAACAAGAGAAAGAACGTTGAACAAGAAATGGAGACTTTAAAGGTAGCTCCTTTTGGGGTACTCAGGATCACTCGTCAGACCTTCAAAAATCAACAAGATATCACTAGTACCAGCGGGGCTAAAAAGTCTAAGAAAGCAGTAAACGACACTAACAAGCAGCAGCAGCAACTCGTCGTTTATAGCAAAAAAGGGCGAAAAATATCGATTGACAGATGGTCTGCTGAGAGGTATAAGATGGCAGAGGAGAATATGTTGAAGGTAATGAAAGAAAAAGAAGCTGTGTATGGAAACCCAATAATGAGACCAGACTTGCGATCAGAAGCACGAAAGTATATTGGGGACACTGGTTTACTTGATCATTTGCTCAAGCACATGGCTGGAAAAGTAGCACCGGGAGGAGTTGAAAGATTCCGACGACGACACAATGCCGAAGGTTCCATGGAATACTGGTTAGAGAGTGCGGATCTTGTTGATATCAGAAAGGAAATGGGTGTGCAAGATCCTTACTGGACTCCTCCCCTTGGATGGAAGCCTGGAGACCCCATTTCACCAGATCATGATACTAGTAATGTGCTCAGACAGATAATGGAGGAAATAATTAAGTTGAAACGAGACATGCAAGATCTCAAATCAAAAGTGGAAGCCATTTTGGTTGCTACTCATAGTTCTTGTCAGTCAAATTTGAACTATGAGGATCATGATTCCCAATCTTCTAAGCAGGAGATTTATGCTGACCTGGTTCATAAAAAGGCTAAAGTTGAAGAACAGTTAAAAGAAATTACTCTGACTTTGAATGGCATGGAGGGTCAACTTGGAATGCTGAAGCCAACAATGTCAGAATCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACATTGACAGAAAACATTGGAGAAGTGAGTAATGACAAAGGAACAAAATCAGCGGAGACACAAATGGTACGAAGCAGCGCAGCAGAGAACAAGGCAGCAAAGATAGAAAGACTGAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGGACCTTTGTGTGGCCAAATATGAGCGTGTCTGTGACTAACTTTGATGAACTCACTGTGGTCCCAACCCCAACCTCAGTTTCCTCTTCTACCACATCACCTCCCAACCTTGTCTCCAATTCCATACCTTCCCCTTCTTCACCTGTTAAGCCACTAGCAGAGAGGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGACCCTTTTCCCCTCATCTTTCTCCTCCATTAGAGACTCCAAAATCCACAATCACCAACAACGATTCTTCTATTAACCTTAATGAGACTCCTCTGGCCCAAGACTAG 1635 0.4398 MGTEFAIKTLCRSISADEFKQRRNLLASPAEENFLNHNTPLINDAASKQGPCWSQLKFAGMLQWGQRRQVRFLGRHDEQNVESLPELQMPVFESRERTYNKRKNVEQEMETLKVAPFGVLRITRQTFKNQQDITSTSGAKKSKKAVNDTNKQQQQLVVYSKKGRKISIDRWSAERYKMAEENMLKVMKEKEAVYGNPIMRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESADLVDIRKEMGVQDPYWTPPLGWKPGDPISPDHDTSNVLRQIMEEIIKLKRDMQDLKSKVEAILVATHSSCQSNLNYEDHDSQSSKQEIYADLVHKKAKVEEQLKEITLTLNGMEGQLGMLKPTMSESLTPPALLLGPTSSLTLTENIGEVSNDKGTKSAETQMVRSSAAENKAAKIERLKSGFKICKPRGTFVWPNMSVSVTNFDELTVVPTPTSVSSSTTSPPNLVSNSIPSPSSPVKPLAERRPVSTATLTHVTGPFSPHLSPPLETPKSTITNNDSSINLNETPLAQD* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4299 544 MobiDBLite consensus disorder prediction 519 544 - -
Psa4g4299 544 Coils Coil 95 115 - -
Psa4g4299 544 Coils Coil 349 369 - -
Psa4g4299 544 PANTHER PROTEIN DYAD 1 529 - -
Psa4g4299 544 Coils Coil 291 311 - -
Psa4g4299 544 MobiDBLite consensus disorder prediction 467 544 - -
Psa4g4299 544 MobiDBLite consensus disorder prediction 467 489 - -
Psa4g4299 544 MobiDBLite consensus disorder prediction 130 149 - -
Psa4g4299 544 PANTHER PROTEIN DYAD 1 529 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4299 Psa-Chr4 378187258 378189439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4299 166 251 PHD Transcription Factor Family AT5G22260 38.889 4.46e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4299 - - var:108339226 603.979