Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4291 ATGGGTACTTCTGAAAAAGAGTACGATGTATTCATTAGCTTTAGGGGAGAGGACACTCGTAAAACCTTCACTGCCCAGCTTCATCAAGCTCTTACAGATAACAATATCAATACATACATTGATTATATTCTTAAAAAAGGAGATGAAGTTGGACCTTCTCTTGCCAAAGCAATCAAGGACTCACATATCTCTCTTGTAGTTTTCTCAGAAAACTATGCAACTTCAAAATGGTGCTTGGATGAACTCCTCCACATACTCCACTGCAGACAACTTCATGGACAGGTAGTTATACCCGTCTTCTGTGATGTAGATCCATCACATGTACGTCATCAGAAAGAGACTTATCAGAAAGCATTTGCAAAATACATGAGAGAACTAGCCACCAGTAAATCTCATCTAGACAAAGTTTTGGAGTGGAAAGCTGCTCTCTCGTCCGCCGCCAATATATCTGGATGGGACTCTCGCAAATATAGGGATTATTCTCAAGTTATCCAGGAAGTTGTGGCAGATGTTAAGCAGAAGTTGTCTCTCATGTTTCCTAATGAACTGAAGAACCTTGTTAAAGTGGATGAAAAGGATCAACATATTGAATTATTACTGGAAAAGATACCAAGAATCGGAATTTGGGGCATGAGTGGAATAGGAAAGACAACCATAGCTAAACAGATGTTTGCCAAGAACTTTGCGCATTATGATAACGTGTGTTTCTTGGAAAATGTAAGCGAAGAATCAGATAAGTTTGGACAAATGTATGTTCGTAATAAGCTTCTTAGTGAGCTTCTGAAGCGAGAAATTACTGCATCTAACGTTCACGGACAACACACGTTCATCAAGAGGAGGCTCGGTGGTAAAAAAAGTTTTATTGTACTTGATGATGTTGATAATGCTACACAATTAGATGATTTGTGTGGAGTACTTGACAACCTTGGACATAACAGTAGACTCATTATCACAACGAGAGACAAAGATATTCTCGGTGGAAAAGTTGATAAGATATATGAGGTCACACCATGGAAGCTTAAAGACTCTCTAAAGCTTTTCAGCTTAGGAGCCTTCCAGCAAAGCTATCCCAGAGAGGGGTACGAGCGTATCTCGGAAAGGGCAGTCGAATATGCAGGAGGTGTTCCATTAGCTTTAAAAGTTTTGGGTTTGCATTTTAAATCAAAAAAGCCAAAGTCTTGGCTATCTGAGTTGAATGATTATGAGAACAAAGGAGAAACCTTCCCCGGTATTCAAAAAGTGTTAGAGCTAAGTTATAATGGATTATCATGGCGAGAGAAAGAGATGTTTCTAGACATTGCATTCTTTTTCAAAGATGAAAACAAAGGCTTGGTCACAAGGATACTACATACATGTGATTTCAATGCAACTAATGGAGTAGAAATCCTAGAAAATAAAGCTCTTATATCCATTTCAAACAGTAATACCATACAGATTCATGGCTTACTACAAAAGATGGCATTTGATATTGCTCGACAAGAAGATAATGATCGAGGAAAGCGTCGCCGACTGAAAGATGCTAAAGACATTTGTGATGTACTTAGAAATAACAGGGGCATTGATGCAGTTGAAGGAATAATATTAGATTTGTCTCAAAAACTAGATTTAATGGTTCAAGCTGACACATTCAACTTGATGACTGAATTAAGATTTCTTAAATTCCACGTCCCCAAAGGTAAGAAGAAACTTAGCACGGTGCATCTTCCTGAAAATTTTAAGCTATATTTTGACAAATTGGCATACCTTGAATGGAATGGGTATCCCTTGAAGTCTCTCCCAGAACCTGTTCGCGCTGAGCAGCTGATTCAGATTTGTTTGCCGCACAGCAACATTGAACATCTTTGGTTCAAGAAACAGAAACTTGTGAATTTAGAGGCAATCGATCTAAGTGGGTGCGAAAAGTTGAAGAACCTCCCTGATTTGTCTGGGGCGCCAAAACTCAAACAGTTGCGCCTTTCTGGTTGTGAAGAATTACTTGAAATTCAGGCTTCTGCTTTTTCTAAGGACACGCTTGTTACTTTGCTACTGGATGGGTGCAAAAAATTGTCAAGTCTTATGGGTGAGAAGCATTTAAAATCTCTAGCGAACTTCAGTGTCAAAGGCTGCTACGGTCTGAAGGAATTTTCGTTGTCTTCGGATTCACTAAGAAGGTTGGATTTGAGCAATACAGGAATCGAAATATTGCACCCGTCAATTGGTGGTATGACCAATCTTTATTCGTTAAATCTAGAAGGTTTAAATCTAACAAGTCTACCGATTGAACTGTCTCACTTGGCACTTACTGAACTTCGGGTTTCTAAGTGCAGTGTAGTAACTAAATCAAAGTTAAAAGCCCTATTTGATGGTCTAAGATCATTAACATTACTACACTTGAAAGACTGTTGTAACTTGTTTGAACTCCCTGCAAACATTAGTTCCTTATCATCATTGCAAGAGTTAAGACTAGATGGAAGCAATGTGAAGGAGTTGCCTGCTAGCATCAAATACCTGTTAGAGCTAGAAGTTCAGTCTTTAGACAATTGCAGTAAGCTTCAATGTCTGCCAGAACTGCCTTTAAGCATCAAAGAGTTTCAGGCTGACAACTGCTTGTCGTTAACGACAGTATCCACTTTGAAGACTTTTTCAGTAAACATGATTGGACAGAACAAATACATTTCATTTCAGAATAGCATTAAGATGGAATTGGATGGACCCTCCCTTGCCTGCATGACGGAAGATGCCATGTTAACAATGAAAAGTGCTGCCTTTCACAATGTATTAGTGAGAAAGTACAGATTCCAAACCCACAGCTACAATTATAACAGCGCCGAGGTATGTCTGCCAGGACACAGAATTCCAAGTCAGTTCAAACAACGATCCACCACATATGCCTCCTTAACTATCGACGTTCTCAACTGGGTTGGCTTCATTTTAGCAGTTGTCGTCACTCCATCTAACATAACACAAGAGAGTGAATACTTTGTTGGAATCCTATGTCAATGCTATTCGGAAGATGGAAGGACCGAGGTGGGAAATAAGTCTAAGTGGAAGCCTAAACTGGTTACAAATTTGAAAATGGATCACATTTTTGTATGGTACGATCCATTCCTTTGTGATACCATACTCAGAAGGAATGAAAGAAAGGTTTCTTTTAAATTCTGTATTACAACTTATACAACTAGTGGCAGAGAACTTGGCGACCTTTTAAAAATCAAAGAGTGCGGGGTTTGTCCAATTTACTACTCAGAAAGTCAGAAGGTTTTAGGCACAGGGAATTTAGACAAGGACTTGGAAAAAGAGTTGTATCAGGAAATTGAACATGAGAGATCAGTTGAAGGCTATGATGAGGGAGAAAGCATTGACATCGAACCAAATTACAAGGAAGGCACGGGCATACAGAACCAAGAGTCGGACTGTTTAATCGGTATGAAACTTTTTAAATTCTCTCACAAATGTTGTATGTTATGTTTCTTTTGA 3456 0.3892 MGTSEKEYDVFISFRGEDTRKTFTAQLHQALTDNNINTYIDYILKKGDEVGPSLAKAIKDSHISLVVFSENYATSKWCLDELLHILHCRQLHGQVVIPVFCDVDPSHVRHQKETYQKAFAKYMRELATSKSHLDKVLEWKAALSSAANISGWDSRKYRDYSQVIQEVVADVKQKLSLMFPNELKNLVKVDEKDQHIELLLEKIPRIGIWGMSGIGKTTIAKQMFAKNFAHYDNVCFLENVSEESDKFGQMYVRNKLLSELLKREITASNVHGQHTFIKRRLGGKKSFIVLDDVDNATQLDDLCGVLDNLGHNSRLIITTRDKDILGGKVDKIYEVTPWKLKDSLKLFSLGAFQQSYPREGYERISERAVEYAGGVPLALKVLGLHFKSKKPKSWLSELNDYENKGETFPGIQKVLELSYNGLSWREKEMFLDIAFFFKDENKGLVTRILHTCDFNATNGVEILENKALISISNSNTIQIHGLLQKMAFDIARQEDNDRGKRRRLKDAKDICDVLRNNRGIDAVEGIILDLSQKLDLMVQADTFNLMTELRFLKFHVPKGKKKLSTVHLPENFKLYFDKLAYLEWNGYPLKSLPEPVRAEQLIQICLPHSNIEHLWFKKQKLVNLEAIDLSGCEKLKNLPDLSGAPKLKQLRLSGCEELLEIQASAFSKDTLVTLLLDGCKKLSSLMGEKHLKSLANFSVKGCYGLKEFSLSSDSLRRLDLSNTGIEILHPSIGGMTNLYSLNLEGLNLTSLPIELSHLALTELRVSKCSVVTKSKLKALFDGLRSLTLLHLKDCCNLFELPANISSLSSLQELRLDGSNVKELPASIKYLLELEVQSLDNCSKLQCLPELPLSIKEFQADNCLSLTTVSTLKTFSVNMIGQNKYISFQNSIKMELDGPSLACMTEDAMLTMKSAAFHNVLVRKYRFQTHSYNYNSAEVCLPGHRIPSQFKQRSTTYASLTIDVLNWVGFILAVVVTPSNITQESEYFVGILCQCYSEDGRTEVGNKSKWKPKLVTNLKMDHIFVWYDPFLCDTILRRNERKVSFKFCITTYTTSGRELGDLLKIKECGVCPIYYSESQKVLGTGNLDKDLEKELYQEIEHERSVEGYDEGESIDIEPNYKEGTGIQNQESDCLIGMKLFKFSHKCCMLCFF* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4291 1151 Gene3D - 173 331 IPR027417 -
Psa4g4291 1151 Gene3D Ribonuclease Inhibitor 451 708 IPR032675 -
Psa4g4291 1151 Gene3D Ribonuclease Inhibitor 709 892 IPR032675 -
Psa4g4291 1151 SMART till_3 7 149 IPR000157 GO:0007165
Psa4g4291 1151 Gene3D - 4 172 IPR035897 -
Psa4g4291 1151 SUPERFAMILY L domain-like 527 871 - -
Psa4g4291 1151 PRINTS Disease resistance protein signature 205 220 - -
Psa4g4291 1151 PRINTS Disease resistance protein signature 280 294 - -
Psa4g4291 1151 PRINTS Disease resistance protein signature 372 386 - -
Psa4g4291 1151 PRINTS Disease resistance protein signature 619 635 - -
Psa4g4291 1151 Pfam NB-ARC domain 205 396 IPR002182 GO:0043531
Psa4g4291 1151 Pfam TIR domain 8 184 IPR000157 GO:0007165
Psa4g4291 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 954 IPR044974 GO:0006952
Psa4g4291 1151 Gene3D - 339 423 IPR042197 -
Psa4g4291 1151 PANTHER NB-ARC DOMAIN PROTEIN 12 954 - -
Psa4g4291 1151 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 152 IPR035897 -
Psa4g4291 1151 SUPERFAMILY "Winged helix" DNA-binding domain 411 514 IPR036390 -
Psa4g4291 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 433 IPR027417 -
Psa4g4291 1151 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4291 Psa-Chr4 377840657 377846079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4291 3 834 WRKY Transcription Factor Family AT4G12020 29.812 4.09e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4291 - - cam:101489032 1667.51