Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4286 ATGAAGTACTTGCAGTTACGGTATCACCTGAAACCAATAAAGAATGACAAGTTTAAATTTCAAAAACTCACAACAGCAAAAGCAACTCTGTTACCGCAAGGAACATCTTCAACAGTCCAACCAGTTATACAAAATGCTATGGACATATTCACATCATCCGGAACAGCTCAGGCAGCTCACACACCTGATGTCCAAGAAGGTAGTGGTACAGAAGAAATGGACTCAGAAGAAGAACTCAGAGAAAAGAAGAAATTGTTACTAGGAGGAATGAAACTGCCAGGATCAATTGACTCCAGAAGAAAGGCAAAAGATGAATATGTTCCCGCACTTCTATTGTTGTGTCATGATTATCCTAGGATGGTGACAAAGATAGATAGGAGATTTGATGGAGTAAAGGTGGCTGCTGAAAATGGGAAGACATTTGTTGCTGGTGCTGCTATCATTGTCGTACCCCTTGGAGTGCTGAAAGCAAACATCATAAAATTTGAGCCAAAGCTTCCAGAATGGAAAGAAGCTGCGATTGCTGATATTGGGAGTTACAACAAATCAGCAGGGGTCGCTCACCATATCCAGCCTGTCATGAGGTTGCAGATTTTGGTTTTGGTTAAAAATGCACCTGATGGGAAATATTCCGTTGAAACAAGTTTGAAAGTGGAGAATTTGAGCTTGCTAAACAAACTTTTAAGGAAGCTCTTAGTGATGGAATTTGGCTTTCTTTTCTTTAGCGAGGCAAATAAGTCTTCCATTGATGCTGCTATTTCTACTCTTCAGTTCAAGGACATATTACTTGAGCAGTTAAATGAGTCTGGAACTGCAAGCATGTTATATCGCCTGATCTTGTTCAAGTACCCGGACTACATTGATGCCAATCTGAGGCTAGCTGCTATGGCAAAGGCTCGGAACAACATTTTATTGAGCATTGAACTGGTTAATGATGCCCTGAAGGTGAATGACAAGAGTCCAAATGCATTATCTATGCTGGTTGAGCTGGAATTGAAAAATGACGATTGGGTGAAGGCAAAAGAAACTCTCCGGGCAGCTAGTGATGCCACTGATAGGAAGGATTCATATGTTACACTTTCACTAGGAAACCGGAACTACTTTGCTGCAGTTCGCAATGAAAAGAGAAATCCAAAGCTAGAAGCGACTCATTTGGAAAAGGCCAAGGAGCTTTATACAAGAGTTATGATTCATCATTCTTCTAATTTATATGCTGCCAATGGTGCTGCTGTTGTTTTTGCGGAAAAAGGCCATTTTGATGTTTCAAAAGATATCTTTACTCAGGTTCAAGAAGCTACCAGCGGCAGTGTTTTTGTCCAGATGCCTGACGTTTGGATAAATCTGGCTCATGTTTATCTTGCTCAGGGGAATTTTGCATTCGAGGACTACTTCAAGAGGCTTTTCAATTTCAATAAGGACAAAGATGGTTACTGGAAGTGGTTGGCTGGTGACTTGGCCTCAGGAGCACGAATCTAA 1476 0.4106 MKYLQLRYHLKPIKNDKFKFQKLTTAKATLLPQGTSSTVQPVIQNAMDIFTSSGTAQAAHTPDVQEGSGTEEMDSEEELREKKKLLLGGMKLPGSIDSRRKAKDEYVPALLLLCHDYPRMVTKIDRRFDGVKVAAENGKTFVAGAAIIVVPLGVLKANIIKFEPKLPEWKEAAIADIGSYNKSAGVAHHIQPVMRLQILVLVKNAPDGKYSVETSLKVENLSLLNKLLRKLLVMEFGFLFFSEANKSSIDAAISTLQFKDILLEQLNESGTASMLYRLILFKYPDYIDANLRLAAMAKARNNILLSIELVNDALKVNDKSPNALSMLVELELKNDDWVKAKETLRAASDATDRKDSYVTLSLGNRNYFAAVRNEKRNPKLEATHLEKAKELYTRVMIHHSSNLYAANGAAVVFAEKGHFDVSKDIFTQVQEATSGSVFVQMPDVWINLAHVYLAQGNFAFEDYFKRLFNFNKDKDGYWKWLAGDLASGARI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4286 491 Gene3D Tetratricopeptide repeat domain 239 487 IPR011990 GO:0005515
Psa4g4286 491 MobiDBLite consensus disorder prediction 54 76 - -
Psa4g4286 491 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 262 459 IPR031101 GO:0006355|GO:0016570
Psa4g4286 491 SUPERFAMILY TPR-like 274 458 IPR011990 GO:0005515
Psa4g4286 491 Pfam Flavin containing amine oxidoreductase 121 179 IPR002937 GO:0016491
Psa4g4286 491 Gene3D - 42 193 IPR036188 -
Psa4g4286 491 SUPERFAMILY FAD/NAD(P)-binding domain 120 180 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4286 Psa-Chr4 377350838 377353284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4286 457 484 Antiporters AT5G13490 85.714 4.32e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4286 K15176 - gmx:100794371 367.081