Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4267 ATGGCCTGCGAGATGGGAGATTACCTGCTAAACAGAGGAGAAGACGTTTGGCCAACCCTTGCGGAAGCCATTGAAGATTCACATGTCTCCATCGTTGTATTTTCAGAAAACTACGCTTCTTCTAAATGGTGTTTGGAAGAGCTTGTGAAAATACTTGAATGCAGAAGAAAAGTTGTTCACGGTCAAGTTGTTATACCTGTTTTCTATAAAACAGATCCGTCTCACATTAGAAATCAGAGTGGGAGTTATGAGAAAGCGTTCGCTAAACATGAGCGAGATCTTGGAAATAGTGAAAGTGATGATTCTAAACAAAAAGTGCTTAATTGGAAAGCTGCTCTTACTGAAGCAGCTAATATTTCTGGATGGGACTCCAAAACACATATGGATGAATCTGACCTCATTGAGAACGTTGTGAATGATGTATTGCAAAAGCTACAACTGAGGTACCCTAATGAGCTAGAAGGTATTGTTGGAAGTGAAAATTTTTGTGGAGTGGTAGAAACATTAATGACAAGTATTCAGATACTTGGAATTTGGGGTATGGGTGGAATGGGAAAGACAACCATTGCGAAAGTATTGTTTGCGAAATTCTTTGCCCAGTATGACCATGTATGCTTTGCTAATGCGAAAGAATATTCACTCAGCAAGCTTCTGTCTGAGCTACTAAAGGAAGAAATTTCACCATCTAATGTTGTAGGATCTACATTCCATATGAGGAGGCTGAGAAGTAAAAAGGTTTTCATTATACTTGATAATGTGGACAGTTTAGATCAGTTTGAATATTTATGCAGGGATTTCGGTGACCAAAACATAATGCGTAAAGAATGTGGCATAAACCCTGCAACTCATACACGATTGAGCGGGAGTGAAGCGCTTGAAGTAATTAAAGAAAACAAGGGGACTAGCTCAATTGAAGGCATTACACTGGATTTGTCTCAAAATAATGATTTGCATTTACGTTCCGACACATTCACCAAGATGAAAGCCTTAAGAATTCTTAAATTCTATATTCCATTGGGTCAGAGTTGTAGTAATGCATACCTCAACCTTCCCATGCTACTTGAGCCATTTTCTAGTGAACTGAGGTACTTTGAGTGGATTGGATACCCTTTTGAGACACTTCCACAACCTTTTTGCGCCAAGTTGCTTGTTGAGATTCGTATGCCGCACAGTAATGTTAAACGACTATGGCAGGGGATGCAGGACCTTGATAAACTAGAGGTGATTGACCTCGGTGAATGCAGACATTTTGTTCAGCTTCCGGATTTGTCTAAGGCATCAAAACTTAAATGGGTTAATCTCTCCGGTTGCGTGAGTCTGGTGGATCTTCATCCATCTGTTTTTTTGGCTGAAACACTTACTACTCTGATACTTGATGGGTGTACAAAGCTTAGGAGGGTTAAAGGTCGGAAACATTTAAAATTTTTGGAAAAGATCAGTATCAATGGCTGCACAAGTCTTGAGGAATTTGCCGTCTCCTCGGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGGATTCAAACACTTGACCTATCAATTGGGCTTCCTCACAATCTTAAGCGGCTTAATCTTGAGGGTTCAAGACTTGTGCATCTTCCAAAGGAGTTACACAGCCTGACATCTATTAAGGAGCTAAGGATTTCAGGCAGTGGACTAAAAGTCAAGAAACAGCAGCTACATATCTTGTTTAATGGCTTAAGATCCCTACAAATACTACATTTGAGGGATTGTAATAACTTGTTTGAACTTCCTGACAACATCAGTGTCCTATCACAATTACAGGAATTAATTCTAGACGGAAGCAACGTGAAAAGGTTGCCTGAAAGTATCAGGAATCTTCAAGAGCTAGAAGTTCTGTCATTGAAGGATTGCAGGGAGATTCAGTACCTTCCAGAGCTCCCCCCTCTCATCAAATTGTTAGATGCCAGTAACTGCACGTCCCTGGTTTCAGTTTCGGATTTAAAAACTATTGCAACAAAGATGATGGGAAATGCCAAATACATTTCATTCACGAACAACCTGAGTTTGGATGGACATTCACTCAAACACTTAACGGAAAGTCTCAATTTAACAATGATGAGCGCTGCATTTCAAAATGTGTCTGTTAGAAGACTTCGCGTGGCTGTTCACAGCTACAATTATACCAGTGTTGATGCTTGTCTACCAGGAACAAGGGTCCCAAGGCAGTTCAAATATCAAACTACTACCGAGTCCTCCATTACCATTGAACTTCCCAACCATTCGAACTTACTGGGATTTCTTTACTCAGTGGTTCTTTCTCCAGCAGCTGGAATGAAGAAGGGTGGAGGAGCTAATATAAAATGTCAATGCAAATTGGGAGAAGAAGGTACAAAGGTTACAAGGTTTAATACTTATGGCACAGAACTGAACTCGGATCATGTTTATGTATGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGCTTTGTTTTGAGTTTTGTGTTACTAATGGTATGGAGGAAGTTCATGGTTCAATCCGTATTAAAGAGTGTGGGGTACGACCCGTATGTGTTGATGAACTGCAGAGTGTTTTACAGCAATTGGATTTGGATTCGGAAAAGAAAAATGAGTTGAACAAGGCAGTGGAATTAGAATCAGGACGTAGGATAACCTTGAAGCCAATTGAAAAGCGTTCCACAAGCATTATACAAGAATTAGACTCAGAGATAGTTGAACCAGAGACAAATTCTAATTTGGAAGAGAGCAGTGTTGGAAAAGGTCGACATCATAATACCTCAAAACCTTCAAAAGGTTGCAGTCACTTCTTTTCTATTGACAAACTTCGGGTTTCATCTTTTCTGAAAGTTTCAAAAATACAAACCAAGTTCAGTGCTGCATGTGGTAGCAAGGAGAATGCCAAAAACTCTACAGAAGACGTCAAAAGCAAAGAAAATAAAGGAAGACCATCTGAATCTAAAGCTAAATTTCATCTACCGGTAACGTCAACGGCTGAAGACAACACTTCTGATAATATACCAGTTGAAAACAACTATGATTCGCAAGATAATTTTGACGAGACCAAGAATTCAGAAGAAAAACCAAATATAGCAGGAGGACAAATCACTGTTCCCGACACCAATGATCTGATAAGTGAACCAGAACAAAAAAAAGAAAATGCACCAATAATGAATCTTAGCGAACCTGAAAGTGATCAAAAAGATGGATCAGATGAGGACCCTTTTTCTGAACTTGAGAGCATCCTGTTGGGAAGTCCAGAGCCCTCGCCAAAAGCAACATGTTCCACAAATAATGACGCTGTAAGAGAAGCTTTGCATAACCTTGAATGCGTATTGGAAAATTCACTCGAGTCCATTATCAGTGATGTTGAACTACAACGGCAACTACATATGTCTTTGGAATACATAAAACAGGCATCTCATGAAAATGTTTCTCCTAATGTTGTGAAGCTTGTCCAGAAAATGACATCCACTGTTGAGAACCTCTTCAAAGACTTTGTCAGGACTAAAAAAGTGGTTGAGGATCACATTAATGCATTGAAACAAAAAGAAACGCTCATGCAGCGAGTGAGAGATGTTAAGAAACAAAAGGAATCAAAACAGAAAGAAAAGAGTCAGTTGGTAAATGAAGCCAAGCGTCTCAAGGAAGAGGGTGAAAAGGTGGATGAAGAAATTCGAATTCTTGTTGAGCAAAAGAAAAGTATTGAGTTGGAAATAACCAAGCTGAAGGAGAGCATGGAAAGATGTGAAGTGAAAGATAGAAAGTGA 3765 0.3931 MACEMGDYLLNRGEDVWPTLAEAIEDSHVSIVVFSENYASSKWCLEELVKILECRRKVVHGQVVIPVFYKTDPSHIRNQSGSYEKAFAKHERDLGNSESDDSKQKVLNWKAALTEAANISGWDSKTHMDESDLIENVVNDVLQKLQLRYPNELEGIVGSENFCGVVETLMTSIQILGIWGMGGMGKTTIAKVLFAKFFAQYDHVCFANAKEYSLSKLLSELLKEEISPSNVVGSTFHMRRLRSKKVFIILDNVDSLDQFEYLCRDFGDQNIMRKECGINPATHTRLSGSEALEVIKENKGTSSIEGITLDLSQNNDLHLRSDTFTKMKALRILKFYIPLGQSCSNAYLNLPMLLEPFSSELRYFEWIGYPFETLPQPFCAKLLVEIRMPHSNVKRLWQGMQDLDKLEVIDLGECRHFVQLPDLSKASKLKWVNLSGCVSLVDLHPSVFLAETLTTLILDGCTKLRRVKGRKHLKFLEKISINGCTSLEEFAVSSDLIENLDLSSTGIQTLDLSIGLPHNLKRLNLEGSRLVHLPKELHSLTSIKELRISGSGLKVKKQQLHILFNGLRSLQILHLRDCNNLFELPDNISVLSQLQELILDGSNVKRLPESIRNLQELEVLSLKDCREIQYLPELPPLIKLLDASNCTSLVSVSDLKTIATKMMGNAKYISFTNNLSLDGHSLKHLTESLNLTMMSAAFQNVSVRRLRVAVHSYNYTSVDACLPGTRVPRQFKYQTTTESSITIELPNHSNLLGFLYSVVLSPAAGMKKGGGANIKCQCKLGEEGTKVTRFNTYGTELNSDHVYVWYDPFHCDSILKFYEPKLCFEFCVTNGMEEVHGSIRIKECGVRPVCVDELQSVLQQLDLDSEKKNELNKAVELESGRRITLKPIEKRSTSIIQELDSEIVEPETNSNLEESSVGKGRHHNTSKPSKGCSHFFSIDKLRVSSFLKVSKIQTKFSAACGSKENAKNSTEDVKSKENKGRPSESKAKFHLPVTSTAEDNTSDNIPVENNYDSQDNFDETKNSEEKPNIAGGQITVPDTNDLISEPEQKKENAPIMNLSEPESDQKDGSDEDPFSELESILLGSPEPSPKATCSTNNDAVREALHNLECVLENSLESIISDVELQRQLHMSLEYIKQASHENVSPNVVKLVQKMTSTVENLFKDFVRTKKVVEDHINALKQKETLMQRVRDVKKQKESKQKEKSQLVNEAKRLKEEGEKVDEEIRILVEQKKSIELEITKLKESMERCEVKDRK* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4267 1254 PRINTS Disease resistance protein signature 175 190 - -
Psa4g4267 1254 PRINTS Disease resistance protein signature 240 254 - -
Psa4g4267 1254 PRINTS Disease resistance protein signature 612 628 - -
Psa4g4267 1254 ProSiteProfiles TIR domain profile. 1 145 IPR000157 GO:0007165
Psa4g4267 1254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 281 1210 IPR044974 GO:0006952
Psa4g4267 1254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 256 IPR044974 GO:0006952
Psa4g4267 1254 Gene3D Ribonuclease Inhibitor 496 699 IPR032675 -
Psa4g4267 1254 Gene3D Ribonuclease Inhibitor 300 495 IPR032675 -
Psa4g4267 1254 Coils Coil 1179 1251 - -
Psa4g4267 1254 Gene3D - 4 141 IPR035897 -
Psa4g4267 1254 SMART till_3 4 119 IPR000157 GO:0007165
Psa4g4267 1254 PANTHER NB-ARC DOMAIN PROTEIN 18 256 - -
Psa4g4267 1254 PANTHER NB-ARC DOMAIN PROTEIN 281 1210 - -
Psa4g4267 1254 MobiDBLite consensus disorder prediction 994 1013 - -
Psa4g4267 1254 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 122 IPR035897 -
Psa4g4267 1254 MobiDBLite consensus disorder prediction 967 986 - -
Psa4g4267 1254 MobiDBLite consensus disorder prediction 1026 1042 - -
Psa4g4267 1254 MobiDBLite consensus disorder prediction 906 929 - -
Psa4g4267 1254 Pfam TIR domain 10 151 IPR000157 GO:0007165
Psa4g4267 1254 Pfam C-JID domain 722 853 IPR045344 -
Psa4g4267 1254 Gene3D - 142 277 IPR027417 -
Psa4g4267 1254 MobiDBLite consensus disorder prediction 958 1074 - -
Psa4g4267 1254 SUPERFAMILY L domain-like 309 689 - -
Psa4g4267 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4267 Psa-Chr4 376479777 376489236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4267 269 626 WRKY Transcription Factor Family AT4G12020 31.183 1.98e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4267 - - cam:101515491 1329.69