Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4262 ATGGCGCAAAACGATTCACAATCCGATAAAAATCCCCAAACCCGATTCTACAATCCATACAAAGACCTCGAGGTTTCTAGCCGAAATCTCTACCAACTCCCAACTTCTCCGGAGTTTCTCTTCGACGAGGAAGCTCTCCGTAAACGCCGTTCCTGGGGCGAAAATCTCACCTTCTACACCGGATGCGGTTACCTCGGTGGTTCAATCGCCGGTGCCGGTGTCGGACTCGTTGACGGAGTTCGATCTTTCGAATCCGGAGACACCACAAAGCTCCGGGTTAATCGTATACTTAACTCCTCCGGACATTCGGGTCGGACTTGGGGAAACCGTGTTGGGATCATTGGGTTGCTTTACGCCGGAATCGAGAGCGGGATCGAGGCTGCTAGGGATACGGATGACGCCTGGAACAGCGTTGCAGCGGGACTTGGCACGGGGGCTCTATATCGAGCAGCGAGAGGAGTGAGATCGGCGGCGGTAGCCGGAGCTGTGGGTGGAGTTCTTGTTGGAGCTGCCGTGACGGCAAAACAAGCATTGAAACGATATGTGCCGATATGA 555 0.5423 MAQNDSQSDKNPQTRFYNPYKDLEVSSRNLYQLPTSPEFLFDEEALRKRRSWGENLTFYTGCGYLGGSIAGAGVGLVDGVRSFESGDTTKLRVNRILNSSGHSGRTWGNRVGIIGLLYAGIESGIEAARDTDDAWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVTAKQALKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4262 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
Psa4g4262 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
Psa4g4262 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4262 Psa-Chr4 376167388 376169093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4262 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 71.505 9.70e-84 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4262 K17794 - gmx:100813158 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4262 4 376167388 376169093 Psa4g4262 4 376167388 376169093 ECH
Psa5g6690 5 557733382 557736145 Psa4g4262 4 376167388 376169093 PCT