Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4244 ATGCAGTCTCTAGAATCACTTGCTTTCATTTTAGTATTTGTAATTCTTTTCTTTAATATTTGTGAATCCGATGATTGTAGCAATCCCTCGAAGATCATAACTGTTAGTCAATCAGGCAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAATTCTCAATGGATTCATATCCAAATTTCCTCTGGTGTTTATAAAGAGCAAGTCTTAATTCCCATCAACAAACCATGCATTTATCTTGAAGGTACTGGTAGTCAGTCCACAAGTATAGAATGGGGCTCTCATGAGATTGCTACTTTCTTATCAAAAGCAGATAATACAGCTGCAAAGGGCATTACTTTTACGAATATACTGAACAGGCCAGTCTTGTTAGATGCCACTAAAATCATACAAGCCCGAGCTGCCAAATTCCGGGGAGATAAATGCGCTTTCTATAGCTGTAGTTTTCTTGGAGTGCAAGATACCCTAAATGATGACTATGGTCGCCATTACTACAAAAACTGTTACATCCAAGGTGCAGTCGATTTCATATATGGGCAAGGTCAATCACTCTTTGAGGCAAGTACAATATATTTTTCAACGGGAAAATCGGGTCTAAAATCGTATGGAGTAATTGCAGCACAATATAGAAATTCACCGAATGATCCAAGCGGGTTTGTGTTTAATAAATGTAACATAAGTGGGACAGGAGGAAAGTTTGAACTCGGAAGGGCTATGGACTCTTATGCAAGAGTGATCATAGCAAATTCTTACCTATCAGATGCTGTTCGACCTGAGGGTTGGAGTCAGACAACATATGTTGGCCATGAATCAAACCTTACTTTTGTGGAGGAGGGATGCAAAGGACCTGGAGCAGACAAATCAAAACGTGTGAAATGGATGAAGAACTTGAGTCGGCCTGAACTTGATAAATTCTTGAGTCTCTCTTTTATTGATCAAGAAGGATGGATTTCCAAATTGCCGGAAAGCATATTCCATTAA 996 0.3886 MQSLESLAFILVFVILFFNICESDDCSNPSKIITVSQSGKANFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPINKPCIYLEGTGSQSTSIEWGSHEIATFLSKADNTAAKGITFTNILNRPVLLDATKIIQARAAKFRGDKCAFYSCSFLGVQDTLNDDYGRHYYKNCYIQGAVDFIYGQGQSLFEASTIYFSTGKSGLKSYGVIAAQYRNSPNDPSGFVFNKCNISGTGGKFELGRAMDSYARVIIANSYLSDAVRPEGWSQTTYVGHESNLTFVEEGCKGPGADKSKRVKWMKNLSRPELDKFLSLSFIDQEGWISKLPESIFH* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4244 331 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Psa4g4244 331 PANTHER PECTINESTERASE 1 328 - -
Psa4g4244 331 SUPERFAMILY Pectin lyase-like 29 324 IPR011050 -
Psa4g4244 331 Gene3D - 31 329 IPR012334 -
Psa4g4244 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4244 Psa-Chr4 374815246 374816967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4244 31 323 Carbohydrate Esterase AT5G47500 36.039 4.38e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4244 - - cam:101494460 470.7