Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4242 ATGAACATGGCTGTTGCTGAGGAAGAATCAGAGGGAGAGATTCATGTCCCAGCTGAAATTGATTGGAAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTTTATTCTCTGGTGTTTCAGCAACATTGTACCCTGTTGTTGTGTTGAAAACTAGGCAACAAGTTGCTCAATCACAAGTTTCTTGTATCAAGACTGCGTTTTCGTTGATTAAAGGCGAGGGGTTTAGAGCTTTGTATCGCGGATTTGGTACTTCGTTGATGGGTACAATCCCTGCTAGAGCTTTATACATGGCTGCACTTGAGGTTACTAAGAGTAATGTGGGGACTGCTACGGTTGGTTTTGGTCTTGCTGAACCAACTGCTGCTGCGATTGCCAATGCAGTTGCTGGTTTGACTGCTGCTTTGGCTGCACAACTTGTGTGGACCCCTGTTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTGTAATTCAAGTGATCCTAAGGCTTCTTCTATTAGATATGTGAATGGAATTGATGCATTTAGGAAAATTGTTAAGACGGATGGTCCTAGGGGTTTGTATAGAGGTTTTGGGATATCGGTTTTGACGTATGCGCCTTCTAATGCAGTGTGGTGGGCCTCATATTCTGTTACACAAAGGATGGTTTGGGGTGGAGTTGGATATTACTTGAGTAACAAGAAAGTTGGGGAAGGGAGTGATAATAACAACGTGACTAATGCATTGAGGCCGGATACGAAAACGATTATGGCTGTTCAAGGAGTCAGTGCAGCAATGGCAGGAGGTATGTCTGCGTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTGCAAGTCATGGACGGCGATGAGAATGGCCGCCGTGGACCAACTGTGATGCAGACAGTTAGGGGTTTGGTTAAGGAAGGCGGTTGGACGGCTTGTTATAGAGGATTAGGACCTAGATGGGCTTCGATGTCAGTGTCTGCAACAACAATGATCACAACCTATGAGTTGCTTAAACGGCTTTCTGCAAAGAGTCAAGATGTTTTGACATGA 1050 0.4448 MNMAVAEEESEGEIHVPAEIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGFGLAEPTAAAIANAVAGLTAALAAQLVWTPVDVVSQRLMVQGGCNSSDPKASSIRYVNGIDAFRKIVKTDGPRGLYRGFGISVLTYAPSNAVWWASYSVTQRMVWGGVGYYLSNKKVGEGSDNNNVTNALRPDTKTIMAVQGVSAAMAGGMSALITMPLDTIKTRLQVMDGDENGRRGPTVMQTVRGLVKEGGWTACYRGLGPRWASMSVSATTMITTYELLKRLSAKSQDVLT* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4242 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 2 346 - -
Psa4g4242 349 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Psa4g4242 349 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Psa4g4242 349 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Psa4g4242 349 PRINTS Mitochondrial carrier protein signature 260 282 IPR002067 GO:0055085
Psa4g4242 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 346 - -
Psa4g4242 349 SUPERFAMILY Mitochondrial carrier 23 337 IPR023395 -
Psa4g4242 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
Psa4g4242 349 Gene3D Mitochondrial carrier domain 30 347 IPR023395 -
Psa4g4242 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 340 IPR018108 -
Psa4g4242 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Psa4g4242 349 Pfam Mitochondrial carrier protein 125 219 IPR018108 -
Psa4g4242 349 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Psa4g4242 349 Pfam Mitochondrial carrier protein 255 343 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4242 Psa-Chr4 374713463 374715766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4242 1 346 Chloroplast and Mitochondria Gene Families AT1G72820 74.212 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4242 K15121 - gmx:100784616 546.969