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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Psa4g4238
ATGAAAACAATGAAGCATTCATTGACATGGGGGACTCTTTCTGAATCTGATGTGCAACAATCTTCCATGTCTGAAAATCTTACCTTGAAAATGAGTCTTTTGCCTCAACAATGCCATAAGACTAAGGCACTAGATTTTCAATTTCAAGATCAAGATTCTTCTTCTACTCAATCAACTGATCAATCTTATCTCGAAGTCAATTCGGGGCAATCAGGTCCAATTTCTGTCCAGTATAGCAATTCTTCTGCATTCCCTCATGCTGAGACATGCTTTAGTGGCCCATTAGCAGCTCCAAATGGATCACAGAATAATATTCATCCTGCTCAACTAGTAGGAATGGCTCCGGTTCGGGTTCCTTTGCCTCTTGATCTTTGTGAGGCACCTATATACGTGAACGCGAAGCAATACCATGCTATTATGAGACGTAGAGAGTATCGTGCAAAGCTCGAGGCACAAAACAAACTCATCAAAAATCGGAAACCATATCTACACGAATCGCGCCATCTGCACGCATTGAAGAGAGCTAGAGGTAGCGGTGGACGTTTTCTAAACACCAAAAAGCTCAAAGACCTAAAGCTTACTTCAGCACACGACGGTCTTAATGTTTCCACCACTACTCAGTTGAATCCGAGTGAAAATGTACCGGAACCTAAGGCGAATCAAGTGGAAAACTATAGAGACGGTGCTTCTGCAACCACATGTTCTGATGAGACAAGTGCTTCTAATAGTGATGACATGATCCAACAACATGAATCCGACTTCAGATCATGTGGATACCCTTCTCAAATGCAGGGTTTCTCGACCGATATCGGTGGTGGTGGAAATCAACACCGTCTATCGGTCCTTATGTGA
852
0.4284
MKTMKHSLTWGTLSESDVQQSSMSENLTLKMSLLPQQCHKTKALDFQFQDQDSSSTQSTDQSYLEVNSGQSGPISVQYSNSSAFPHAETCFSGPLAAPNGSQNNIHPAQLVGMAPVRVPLPLDLCEAPIYVNAKQYHAIMRRREYRAKLEAQNKLIKNRKPYLHESRHLHALKRARGSGGRFLNTKKLKDLKLTSAHDGLNVSTTTQLNPSENVPEPKANQVENYRDGASATTCSDETSASNSDDMIQQHESDFRSCGYPSQMQGFSTDIGGGGNQHRLSVLM*
284
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Psa4g4238
283
Gene3D
-
125
186
-
-
Psa4g4238
283
MobiDBLite
consensus disorder prediction
225
246
-
-
Psa4g4238
283
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
81
258
IPR001289
GO:0003700|GO:0006355
Psa4g4238
283
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
11
90
IPR001289
GO:0003700|GO:0006355
Psa4g4238
283
MobiDBLite
consensus disorder prediction
201
218
-
-
Psa4g4238
283
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
128
182
IPR001289
GO:0003700|GO:0006355
Psa4g4238
283
ProSiteProfiles
NF-YA/HAP2 family profile.
125
185
IPR001289
GO:0003700|GO:0006355
Psa4g4238
283
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR
11
90
-
-
Psa4g4238
283
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR
81
258
-
-
Psa4g4238
283
MobiDBLite
consensus disorder prediction
201
246
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Psa4g4238
Psa-Chr4
374604588
374606767
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Psa4g4238
7
281
CCAAT-HAP2 Transcription Factor Family
AT1G17590
38.629
8.31e-46
155
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Psa4g4238
CBFB_NFYA
9.5e-27
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Psa4g4238
K08064
-
gmx:100500765
363.614
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Psa5g6685
5
557538762
557542571
Psa4g4238
4
374604588
374606767
PCT
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