Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4234 ATGTTGACTTGCATAGCGTGTTCAAAGCAACTCAATAATGGATCTCTTCATCAAAAAGATGAGGAAGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATCAAGGCTCTCACAGCTCAGATCAAGGACATGGCAGTTAAGGCTTCTGGGGCCTATAAGAATTGTAAGCCTTGTTCAGGGTCTTCCAATTGCAACAAGAACAAAAAGTATGCTGATTCTGATATGGGGTCAGATTCAGCAAGGTTCAATTGGGCTTACCGAAGAACCGGGAGCGCGAATTCAACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCCAGTGGTGAAGCAACACCAACATCGGTTAGCGGTCGTACCGAGTCGGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAACCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAAGGTGGGAATGATCTCAAGAAGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAACTATGACAAAGTTATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCCGTTCCTCTTCCAACCCCACCTATATCTGAAGATGAGAGTTCAAAGATTGAATCTGCAAGGGATAGCCCAGTCACACCTCCTCTAAGCAAAGAGCGTCTGCCCCGTCATTTACTTCACCCAACAGGAATGGGCTACTCCTCGTCAGATTCACTGGAACACCACCATATGCAACCACAGCCTTGCTATGAAACAAGTGGTTTGGCGTCAAAACCTAATCTTTCCGACATTGGTGTGCCAAAGACCGAAAGATCATCCATTGATGCTTCTGTAAGGACAAGTTCCTCAGAAGAGGAAGATGATCACTCTGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACCGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTACCAGGTGGAACCAGAGAACTCAGGCGCGTCCGCTTCAGCCGAGAGAAGTTTGGAGAAACACGTGCTAGGTTATGGTGGGAAGAGAACCGCGCGAGGATACAAGAGCAATACTTGTGA 1113 0.4609 MLTCIACSKQLNNGSLHQKDEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNCNKNKKYADSDMGSDSARFNWAYRRTGSANSTPRMWGKEMEARLKGISSGEATPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKKIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPISEDESSKIESARDSPVTPPLSKERLPRHLLHPTGMGYSSSDSLEHHHMQPQPCYETSGLASKPNLSDIGVPKTERSSIDASVRTSSSEEEDDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGETRARLWWEENRARIQEQYL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4234 370 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Psa4g4234 370 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Psa4g4234 370 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Psa4g4234 370 Pfam Transcription factor regulating root and shoot growth via Pin3 314 369 IPR013591 -
Psa4g4234 370 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 370 IPR044532 -
Psa4g4234 370 MobiDBLite consensus disorder prediction 202 313 - -
Psa4g4234 370 ProSiteProfiles BRX domain profile. 315 370 IPR013591 -
Psa4g4234 370 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4234 Psa-Chr4 374400585 374404512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4234 1 370 Major Intrinsic Protein MIP AT1G31880 46.649 3.38e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4234 - - gmx:100805480 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4234 4 374400585 374404512 Psa4g4234 4 374400585 374404512 ECH