Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4220 ATGATGAACAAACTACAATATCTGGATATTTATAGTAAAGGATACTATTACGCGTTTCTCCAATTTCCGCGGAACTTGTATCTTCCTCAAGGGCTTGAGTCTTTGCCAAATGAACTCAAATACCTTCGCTGGGCATATTACCCTTTGGAGTCCTTACCGTCGAAGTTTACTGCGGAGAATCTTGTTGTGTTAAACTTGCAGTGCAGCCAAGTGAAAAAACTTTGGCATGAAGAGAAGGATGCTGTGAATTTAAAGGAACTAGTACTGAGTTTATCTTCAAACCTGGTGGAGCTTCCAGACTTGTCGAGGGCTAAAAATCTTGCAACGATCGATCTTCGCGCGTGTGTACGGCTGACTAGTATACATCCATCTGTGTTTTCTCTCAACAAGCTTGAGAAATTGGATCTAGGTGGATGTTTTTCCCTCACAAGCCTCAAAAGCAACATCCATTTAAGTTCCCTCCGTTATCTATCCCTTGCCGGTTGCATTGCACTAGAGGAGTTCTCAGTAACTTCAAAGGAAATGGTGTATTTAAATTTAGAATTCACAGGTATCAGAAAACTACCATCATCAATTGGAGTCCAAAAGAAGCTTGAAAAGTTGCTTCTTTCACACAGTTACATCGAGAACTTGCCTAAAAGCATCAGGCATCTTTCTATGCTGCGACGTCTAGAATTACGAAATTGTTGGAACCTTCGAAGTCTACCGAGGCTTCCGTTATCACTGATAACTCTAGATGCCAGTGGTTGTGTATCATTGGAGAATGTAACTTTCCCTTCAACTTCTCTTCAAATGTTAAAGGAAAACAAGACAAGGGTTGCCTTCTGGAATTGCCTGAAACTGGATCAACATTCTCTGAAAGAAATAGAATTGAATGCACAGATTAACATGATGAAACTTGCACACAAGCAAATATCTACATCTAGTAATGATCATGATTATGATGCTCAAGGCACATATGTGTATCCAGGAAGCAGTGTTCCAAAATGGCTGATGTATAGGACAAAAAGTGATTCCATGACTATTAATCTCTCTTTTGTGAATCATTCCTCTGATCAACTGGCCTTTATTTTTTGCTTCATTGTTCCACAAATTGAATCACAGGGTTTCATTTTGAGATTTAATATTAGTGTTGATGGTGAAGATGAAAATATTCAAGTATACTTGGATAGACCTAGTCTTGGAATTAAATCAGATCATGTGTATCTAATGTGTGACCAAGGTTTGTCTCGCTATCTAAATAGTCGGGTGAAGCATCGGTCAAAGTTCAGAATTAAGGTTACAGTGGAATCACGAACACCGATATCAGGGTACATGCCAGTAATGTTGTTGAGAGGTGTAGGGGTCAGCCCAATAAACAGCTCACAGTATCACAACTTCATTCAACACATGGAAATTATTGCTGAAGGTCCAACTTATTTACCAGGTAGGGTAATTTATGTACTTTTCACAATTTACATAGGGTTGCTTATAAAGATAATTTTTCAATGGTTCTAG 1497 0.3874 MMNKLQYLDIYSKGYYYAFLQFPRNLYLPQGLESLPNELKYLRWAYYPLESLPSKFTAENLVVLNLQCSQVKKLWHEEKDAVNLKELVLSLSSNLVELPDLSRAKNLATIDLRACVRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIALEEFSVTSKEMVYLNLEFTGIRKLPSSIGVQKKLEKLLLSHSYIENLPKSIRHLSMLRRLELRNCWNLRSLPRLPLSLITLDASGCVSLENVTFPSTSLQMLKENKTRVAFWNCLKLDQHSLKEIELNAQINMMKLAHKQISTSSNDHDYDAQGTYVYPGSSVPKWLMYRTKSDSMTINLSFVNHSSDQLAFIFCFIVPQIESQGFILRFNISVDGEDENIQVYLDRPSLGIKSDHVYLMCDQGLSRYLNSRVKHRSKFRIKVTVESRTPISGYMPVMLLRGVGVSPINSSQYHNFIQHMEIIAEGPTYLPGRVIYVLFTIYIGLLIKIIFQWF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4220 498 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 2 488 - -
Psa4g4220 498 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 488 IPR044974 GO:0006952
Psa4g4220 498 Pfam C-JID domain 322 405 IPR045344 -
Psa4g4220 498 Gene3D Ribonuclease Inhibitor 1 173 IPR032675 -
Psa4g4220 498 SUPERFAMILY L domain-like 35 281 - -
Psa4g4220 498 Gene3D Ribonuclease Inhibitor 174 321 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4220 Psa-Chr4 373805448 373807304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4220 16 236 WRKY Transcription Factor Family AT4G12020 41.304 1.44e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4220 - - cam:101503346 632.484