Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4149 ATGATGGAAACTGAAAACACATCTGGGAATTCCTTCATGCAGAACTCATCATCACGTACAACTTTTGGTCACTCAGAGTCCAAGCCTGTGAGGCATGGTTCAAACTCAAAGGTTGATTCTGAAGCTTTCAGTATGTCTCAGAAAGAAATCAGCGACGAAGATGCTAGGTTGATTTATGTGGATGATCCTGATAAGACAAATGAGAGATTTGAATTTTCAGGGAATTCAATTCGTACCGGAAAGTATTCTTTTTTCACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATGTTTATTTCCTTATAATTGCTATTCTTAATCAGTTACCTCAACTAGCTGTTTTTGGGAGAGGTGCTTCACTTTTACCATTAACTATTGTTCTTCTTGTTACTGCTGTTAAGGATGCTTATGAGGATTGGAGGAGACATAGGTCAGATAAAGTTGAGAACAATAGATTAGGATTTGTTTTGGTGAATGGTCGTTTCATAGAGAAGAAATGGAAAGATATTAGAGTTGGTGAGATTATTAAAATCAATGCTAATCAACCAATTCCTTGTGATTTTGTTTTGTTGTCGACTAGTGATCCTACCGGTGTTGCTTATGTTCAGACTCTTAATCTAGATGGCGAGTCGAATTTGAAAACTAGGTATGCGAAACAAGAGACTCAGTTTAAGTTTCGGGATAAGGAGAGGTATAGTGGTTTGATTAAGTGTGAGAAACCGAATAGGAACATATATGGATTTCAAGCTACAATGGAGGTTGATGGGAAGAGATTGTCTCTTGGTTCTTCCAATATTGTACTTAGAGGATGTGAGCTTAAGAATACTAATTGTGTTGTTGGTGTTGCTGTGTATTGTGGTCGTGAGACCAAAGCTATGCTCAACAATTCAGGAGCTCCGTCTAAGAGAAGCCGGCTCGAGACTCAGATGAACTCCGAGATCATCATGCTTTCTGTCTTTCTTGTAGCTTTGTGTACAGTCACTTCAGTTTGTGCTGGTGTTTGGTTAAAGCAAAACAAAAGTAAATTAAACCTGTTGCCTTATTATAGGAAATTGGATGTTTCGAAGGGAAAAGAGGAAAATTATCAATATTATGGATGGGGAGTGGAAATCATTTTCACATTCCTTATGTCAGTTATAGTTTTCCAGATTATGATCCCTATATCGTTGTACATTTCTATGGAGCTTGTCCGTGTTGGTCAGGCCTATTTCATGATCAAAGATTCCAGATTGTATGACGAGGCAACAAATTCAAAGTTTCAGTGCAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTTTTTTCGGACAAAACTGGTACTCTCACTGAGAACAAGATGGAGTTTCAATGCGCGAGTATCTGGGGCGTTGATTACAGTTCTGCAAAAGCCGGTCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGTGGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATGAAGAGCTTTTCCAATTATCGAAAAGTGGATTTGCAAACAGAGATGGAAAACGGATTTACGATTTCTTTCTTGCACTCGCAGCATGCAATACTATTGTGCCTCTTGTAATCGACACATCTGACCCTACAGTCAAGCTGGTAGATTATCAAGGGGAATCACCAGATGAACAGGCATTGACTTATGCTGCCGCTGCCTACGGCTTTATGCTTATTGAAAGAACCTCAGGTTACATAGTCATTGATATTCATGGAGAAAGACAAAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAAAGGATGTCGGTTATATTAGGATACAACGACAACTCAGTAAAACTTTTTGTCAAAGGGGCGGATACATCAATGTTTAGTGTAATCAATAAATCATTGAACACAAACATAATACAAGCAACAGAAACCCATCTGCACGCGTATTCTTCCATCGGTTTGAGGACGCTTGTTATTGGGATGCGTGACTTGAATCCTTCAGAATTTGATCAATGGCACTTTGCTTTTGAGGCAGCAAGTACTTCTTTGATTGGTAGGGCTGCTTTGCTTCGTAAGGTTGCAACCAATGTAGAGAATAACCTATGCATATTAGGCGCTACCGCTATCGAAGATAAACTGCAACAAGGTGTGCCGGAATCTATTGAGTCTCTAAGGCAAGCTGGTATTAAAGTATGGGTATTGACCGGTGACAAACAGGAAACCGCAATTTCAATTGGCTATTCCTCAAGGTTACTGACAGGCGGCATGACTCAATTTAGAATTAAGAGCAATAATCGAGAGTCGTGTAGAAGACATTTACAAGACGCACTTCTCATGTCCAGAAAAAATGAGGTTGGCAATTATTTTGACGGAAGTTCCGTTGATGTTGTTTCAACTCCGATGGCCTTGATTATTGATGGTACAAGCCTTGTATATATTCTTGACAATGAACTTGAAGAAGAGCTCTTTGAACTTTCACAAAGATGCTCTGTTGTTCTATGTTGTCGAGTGGCTCCCTTACAAAAGGCTGGAATTGTGTCGCTCGTGAAGAAAAGGACAGCTGACATGACTCTAGCTATTGGAGATGGTGCTAATGATGTATCGATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGACAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTCATACACGGACATTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTACAGAAATGCTGTCTTTGTTCTAATTCTATTTTGGTATGTACTCTTCACTGCCTTCACTGTGACAACTGCTATAAACGAATGGAGCAGTGTGTTGTATTCAATAGTCTACACTGCAGTTCCAACTATTGTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTGCATAATCCTCAGCTTTACGGGGCTGGACAAAGACAAGAGGCGTACAACAAAAAATTGTTTTGGTTGATGATAGCCGATACTTTATGGCAAAGCATTGTTGTCTTCTTTGCTCCTCTCTTTGCATATTGGGGAAGCACTATCGATATAGCAAGCATAGGGGATCTTTGGACTCTTTCAGTAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCACGCATCTATTTGGGGGTCTATCGTTGCAACTTTCATATGTGTCATGATTATTGATGCTATACCGGCACTTCATGGTTACTGGGCTATCTTTGATGTTGCAGGCACTGTATTGTTCTGGTTATGTTTAATTGGAATACAAATAGCAGCATTGCTTCCCCGTTTTGTGGTAAAATTCATTCATCAATATTATTGTCCGAATGATATTCAGATTTCAAGAGAAGTAGAGAAGTTTAAGAATCCAAGGATCAATAGAGACGCAGAGATAGAAATGTTTCACATCTCAAATCCACAAAGATAA 3477 0.3932 MMETENTSGNSFMQNSSSRTTFGHSESKPVRHGSNSKVDSEAFSMSQKEISDEDARLIYVDDPDKTNERFEFSGNSIRTGKYSFFTFLPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRGASLLPLTIVLLVTAVKDAYEDWRRHRSDKVENNRLGFVLVNGRFIEKKWKDIRVGEIIKINANQPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFRDKERYSGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSVFLVALCTVTSVCAGVWLKQNKSKLNLLPYYRKLDVSKGKEENYQYYGWGVEIIFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKAGLENEQVEYSLQVDGKVLKPKMKVKVNEELFQLSKSGFANRDGKRIYDFFLALAACNTIVPLVIDTSDPTVKLVDYQGESPDEQALTYAAAAYGFMLIERTSGYIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGYNDNSVKLFVKGADTSMFSVINKSLNTNIIQATETHLHAYSSIGLRTLVIGMRDLNPSEFDQWHFAFEAASTSLIGRAALLRKVATNVENNLCILGATAIEDKLQQGVPESIESLRQAGIKVWVLTGDKQETAISIGYSSRLLTGGMTQFRIKSNNRESCRRHLQDALLMSRKNEVGNYFDGSSVDVVSTPMALIIDGTSLVYILDNELEEELFELSQRCSVVLCCRVAPLQKAGIVSLVKKRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFIHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTVTTAINEWSSVLYSIVYTAVPTIVVGILDKDLSKRTLLHNPQLYGAGQRQEAYNKKLFWLMIADTLWQSIVVFFAPLFAYWGSTIDIASIGDLWTLSVVILVNLHLAMDVIRWTWISHASIWGSIVATFICVMIIDAIPALHGYWAIFDVAGTVLFWLCLIGIQIAALLPRFVVKFIHQYYCPNDIQISREVEKFKNPRINRDAEIEMFHISNPQR* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4149 1158 Pfam Cation transport ATPase (P-type) 543 625 - -
Psa4g4149 1158 Gene3D - 544 677 IPR023299 GO:0000166
Psa4g4149 1158 Pfam Phospholipid-translocating ATPase N-terminal 58 121 IPR032631 -
Psa4g4149 1158 Gene3D - 133 299 - -
Psa4g4149 1158 MobiDBLite consensus disorder prediction 1 42 - -
Psa4g4149 1158 Pfam E1-E2 ATPase 160 400 - -
Psa4g4149 1158 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Psa4g4149 1158 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 72 1133 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa4g4149 1158 SFLD p-type atpase 425 909 IPR044492 -
Psa4g4149 1158 SUPERFAMILY Calcium ATPase, transduction domain A 157 296 IPR008250 -
Psa4g4149 1158 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 49 1156 - -
Psa4g4149 1158 SUPERFAMILY HAD-like 437 913 IPR036412 -
Psa4g4149 1158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g4149 1158 Pfam Phospholipid-translocating P-type ATPase C-terminal 886 1126 IPR032630 -
Psa4g4149 1158 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 49 1156 - -
Psa4g4149 1158 SFLD C1.7: P-type atpase like 425 909 - -
Psa4g4149 1158 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Psa4g4149 1158 PRINTS P-type cation-transporting ATPase superfamily signature 725 735 - -
Psa4g4149 1158 PRINTS P-type cation-transporting ATPase superfamily signature 845 857 - -
Psa4g4149 1158 CDD P-type_ATPase_APLT_Dnf-like 74 1018 - -
Psa4g4149 1158 Gene3D - 698 898 IPR023214 -
Psa4g4149 1158 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 714 IPR023299 GO:0000166
Psa4g4149 1158 SUPERFAMILY Calcium ATPase, transmembrane domain M 71 1125 IPR023298 -
Psa4g4149 1158 PRINTS Sodium/potassium-transporting ATPase signature 435 456 - -
Psa4g4149 1158 PRINTS Sodium/potassium-transporting ATPase signature 935 955 - -
Psa4g4149 1158 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4149 Psa-Chr4 365532433 365537902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4149 11 1158 Primary Pumps ATPases AT5G04930 69.365 0.0 1678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4149 K14802 - gmx:100791888 1882.46