Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4129 ATGGGAAATAGTGAGGATGGAAAATCCGTTAAGACTGAAAGGTCTTCTTCACCGGTAACAACTGATGAGACCAATCAAATCAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATACTATGGGCAAAGAGTCAACATTCCACCATACTTCAACTCAGTCGTTGCTTCTGGTCATCCTCCTCACCATACATGCAATGGCAATGTTGAGAGTGCTGAGCATGGAGCGGAAAATTGGCTATCTCGGAGCGTGGATACTGAGGGCTCCAGTGATGGAAGTGATGGCAACACTACAAGGATCAATGGAACAAGGAAAAGAATCCGGGACAAAACACCAACAACCACTGATGGAGAAGGGAAAACTGTGATGCAAAATAGTCTAGTTTCTAAAGAGATTGCAGCTTCCAAAATGATGGTGCCAGTTACCCAAACCAGTGTTGCAGAAAAGTTTGTTGGACCTGTACTTTCTTCATGTATGGCCACAACACTGGAGCTGAGGAACCCTTCAACTGTTCCCACTGGTGCTCCGCAACTTGTGGAGTTTTGCCTCCCGAACCTTGGATGCAGAATGAGCGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCATTGACTGCTGAGAATTTGGCGCTGAAATCGGAAATAAATGAATTTACTGAAAACTCTGAGAAGCTGAAGATAGAAAATGCTACATTAAATGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCATTGACTGCTGAGAATTTGGCGCTGAAATCGGAAATAAATGAATTTACTGAAAACTCTGAGAAGCTGAAGATAGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTGGAACAGACAAAAGAGACAATTTTGAATAGCATTGACAAGAGAGATACACCTGTAAGTACAGAAAACTTGCTATCAAGAGTTAATAATTCAAACTCTGGTGATAGAACTGCAGAGGAAGAGAATGGTTTCTGTGAGAACAAACCTATTTCTGGTGTAAAACTGCATCAACTACTTGATGCAATCCCCAGAGCTATCCTGCTGCTGCAGCAACAACAGCACAAGAAATCAATGGAACCCGCAAACAATCACAAACCAGATAGATCCCAGCAAACAAGTACTTCGGTCACTGTAACCATTGCAGCACCAGCATCGCCTTACAGAAGCATCCTTGCTCAGGTCGAAGCCTTGACAAAAACATGGGAGTACACATCAGTTGACCGGTTTTTGCACTATCTACCATTACATCATGTCCATGGGATTTTCAATAGTTTATTCGCCCCTCTCTACGTCGGTTCCACGGTTGAGTTCCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGACGGCGTGAGTCATATCCAACTGAAGGATATGAGGCTGATGAGGCTATAACTGTATTCACCGGAGTTCCAATTATGTACACTCGATTAATACGAGGTTATCATGCCATGGATCCAGAGCTGCGAGCCACTCCTGCATCTAGCGCAAGGAACTTGCGTCTAATGATAATTGCAGCAGAAGCTTTGGTTTCCATATCAGGATTTGTAGCTCAAAAAGACATCCAAATGACAACTTGTTCATCATCTGAATCTTTTAAAAATAGTCCTCTTAACTGGTTTGCTGCATTTATCTCAACAACAGTGGATCATCTAGAGAATGACAATGAAACCGATTTCAACGATAAGGTTAATGGTCTCAAGGAGTTTCTGTCTGATGAAATGGATTACTTCGAGTTCATGACCTTAAATTTGACAGATAAAAAGGACCTCGATTGCTGCTGCAAGAGTATTGACCAAACCGAGCTTCCTTTGATGATGTTGGACTTGGACAACAACAATTTCAGTGGAAAGATTCCTTCTAGTTTGTGGAACTTATCAACTCTGATGGAGTTTTCAGCCGCAAATAACCACTTGGAGGGTTCACTTTTGTGGAGATTGGGAGTGCTGTAA 1971 0.4257 MGNSEDGKSVKTERSSSPVTTDETNQINQPNIHVYPDWAAMQAYYGQRVNIPPYFNSVVASGHPPHHTCNGNVESAEHGAENWLSRSVDTEGSSDGSDGNTTRINGTRKRIRDKTPTTTDGEGKTVMQNSLVSKEIAASKMMVPVTQTSVAEKFVGPVLSSCMATTLELRNPSTVPTGAPQLVEFCLPNLGCRMSAEAEELARRVDALTAENLALKSEINEFTENSEKLKIENATLNAEAEELARRVDALTAENLALKSEINEFTENSEKLKIENATLKEKLKNTQLEQTKETILNSIDKRDTPVSTENLLSRVNNSNSGDRTAEEENGFCENKPISGVKLHQLLDAIPRAILLLQQQQHKKSMEPANNHKPDRSQQTSTSVTVTIAAPASPYRSILAQVEALTKTWEYTSVDRFLHYLPLHHVHGIFNSLFAPLYVGSTVEFLPKFSVSGIWKRRRESYPTEGYEADEAITVFTGVPIMYTRLIRGYHAMDPELRATPASSARNLRLMIIAAEALVSISGFVAQKDIQMTTCSSSESFKNSPLNWFAAFISTTVDHLENDNETDFNDKVNGLKEFLSDEMDYFEFMTLNLTDKKDLDCCCKSIDQTELPLMMLDLDNNNFSGKIPSSLWNLSTLMEFSAANNHLEGSLLWRLGVL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4129 656 MobiDBLite consensus disorder prediction 105 119 - -
Psa4g4129 656 MobiDBLite consensus disorder prediction 359 381 - -
Psa4g4129 656 MobiDBLite consensus disorder prediction 13 28 - -
Psa4g4129 656 MobiDBLite consensus disorder prediction 85 122 - -
Psa4g4129 656 Pfam bZIP transcription factor 195 233 IPR004827 GO:0003700|GO:0006355
Psa4g4129 656 Pfam bZIP transcription factor 238 275 IPR004827 GO:0003700|GO:0006355
Psa4g4129 656 Pfam G-box binding protein MFMR 1 66 IPR012900 -
Psa4g4129 656 MobiDBLite consensus disorder prediction 86 104 - -
Psa4g4129 656 SUPERFAMILY L domain-like 610 653 - -
Psa4g4129 656 Pfam Plant protein of unknown function (DUF863) 507 600 IPR008581 -
Psa4g4129 656 MobiDBLite consensus disorder prediction 1 28 - -
Psa4g4129 656 Pfam AMP-binding enzyme 394 516 IPR000873 -
Psa4g4129 656 PANTHER TRANSCRIPTIONAL ACTIVATOR TAF-1-LIKE ISOFORM X1 193 236 - -
Psa4g4129 656 PANTHER TRANSCRIPTIONAL ACTIVATOR TAF-1-LIKE ISOFORM X1 78 174 - -
Psa4g4129 656 PANTHER TRANSCRIPTIONAL ACTIVATOR TAF-1-LIKE ISOFORM X1 237 350 - -
Psa4g4129 656 PANTHER TRANSCRIPTIONAL ACTIVATOR TAF-1-LIKE ISOFORM X1 1 72 - -
Psa4g4129 656 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 72 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g4129 656 PANTHER G-BOX-BINDING FACTOR 3-RELATED 78 174 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g4129 656 PANTHER G-BOX-BINDING FACTOR 3-RELATED 193 236 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g4129 656 PANTHER G-BOX-BINDING FACTOR 3-RELATED 237 350 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g4129 656 Gene3D - 390 528 IPR042099 -
Psa4g4129 656 Pfam Disordered region downstream of MFMR 70 175 - -
Psa4g4129 656 SUPERFAMILY Acetyl-CoA synthetase-like 393 516 - -
Psa4g4129 656 Coils Coil 198 288 - -
Psa4g4129 656 Gene3D Ribonuclease Inhibitor 571 656 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4129 Psa-Chr4 364268593 364271819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4129 1 65 bZIP Transcription Factor Family AT2G46270 55.882 5.15e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa4g4129 AMP-binding 1.6e-08 CL0378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4129 K09060 K18660 gmx:100820423 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4129 4 364268593 364271819 Psa4g4129 4 364268593 364271819 ECH