Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4034 ATGAACCATGACCAAACGGGATGCGAAGCAGCCCCTGAAGCAGTGGAATTGACCCTGCTATTGACCGCCAATGTGGAAATCTCAGTTGATTCAGTGGAGCCCAAAACCATCTCGGCACAACCATTAGTTGCTTCTGGCTCAGAGGAGAGTTTGGAGAAGAAGCCCGAGGATGGTCCTAAACGGTGCTCCAACTGCAATAAGCGGTTTGGCTTGACACGATTTAATTTTCTATGTGGTAACCTTTTCTGTGATGTACATCGCTACTCAGACAAGCACGACTGTCCATTTGACTACCGCACTACTGGACGGGATGTGATAGCCAAAGCAAGCCCGGTTGTCAAAGCTGAGAAGCTTGACATGATATAG 366 0.4836 MNHDQTGCEAAPEAVELTLLLTANVEISVDSVEPKTISAQPLVASGSEESLEKKPEDGPKRCSNCNKRFGLTRFNFLCGNLFCDVHRYSDKHDCPFDYRTTGRDVIAKASPVVKAEKLDMI* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4034 121 ProSiteProfiles Zinc finger AN1-type profile. 56 102 IPR000058 GO:0008270
Psa4g4034 121 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 21 121 - -
Psa4g4034 121 SUPERFAMILY AN1-like Zinc finger 47 116 IPR035896 -
Psa4g4034 121 SMART AN1_Zf_4 62 99 IPR000058 GO:0008270
Psa4g4034 121 PANTHER AN1-TYPE ZINC FINGER PROTEIN 21 121 - -
Psa4g4034 121 Gene3D - 36 117 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4034 Psa-Chr4 348220243 348220765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4034 21 121 C2H2 Transcription Factor Family AT3G52800 39.604 4.90e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4034 - - gmx:100781607 160.614