Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4030 ATGTCAGTGCTTATGGTGACGAGTTTAGGGGACCTGGTTATCGATTTGTACACCCAAAAGTGTCCCTTAACCTGCAAGAACTTCTTGAAGCTTTGCAAGATTAAGTACTACAATGGCTGTCTATTTCACACCGTTCAGAAGGATTTCACTGCACAGACTGGCGATCCAACTGGAACTGGCACTGCTGGCGATTCTATCTACAAGTTCCTTTATGGTGATCAAGCTCGCTTTTTCAATGACGAGCTTCATATTGATCTAAAGCATTCCAAGACTGGAACTGTTGCCATGGCAAGTGCTGGAGACAATATGAATGCTTCACAGTTCTATATAACTCTGCGTGATGACCTTGATTACCTTGATGGAAAGCACACTGTTTTTGGCGAGGTAGCTGAAGGATTTGAGACTTTGACTAGAATAAATGAGGCTTATGCAGATGGAAAGGGCAGACCATTTAAAAATATCAGGATCAAGCATACTTACATCCTTGAGGATCCTTATGATGATCCTCCTCAGCTACCTGAGTTTATTCCTGAAGCTTCACCTGACGGAAAACCTAAGGACGAGGTATGGCTTGATTGCAGAACTGTATTTAACAGCTTGAGAGCAAGCTAG 612 0.4281 MSVLMVTSLGDLVIDLYTQKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGTAGDSIYKFLYGDQARFFNDELHIDLKHSKTGTVAMASAGDNMNASQFYITLRDDLDYLDGKHTVFGEVAEGFETLTRINEAYADGKGRPFKNIRIKHTYILEDPYDDPPQLPEFIPEASPDGKPKDEVWLDCRTVFNSLRAS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4030 203 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 191 IPR035542 -
Psa4g4030 203 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 SUPERFAMILY Cyclophilin-like 1 176 IPR029000 -
Psa4g4030 203 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 161 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 159 IPR002130 GO:0000413|GO:0003755
Psa4g4030 203 Gene3D - 1 172 IPR029000 -
Psa4g4030 203 CDD cyclophilin_RRM 4 169 IPR035538 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4030 3 166 U-box Gene Family AT5G67530 39.634 1.83e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4030 K12735 - gmx:100794150 356.681