Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4027 ATGACACTATTCTTCTTAATGAAATTCAAGAAATGTGTGATAGATATCATTATCGGGTGTGGTTATTTTGATATGATGCTGATTGACGTTTGTATGCCAAACATGGATTCTTATAACTTTGTTCAATATGTAACCCTACAACACAAAATACCTGTCATTGTGATTTCTTCTGATGCCACAGAAAGTTCTGTCCTAAAGTCTATAATTCATGGCGCATGTGATTATTGGGTTCAACCTCTGCATGAAAAACAATTCAAGACCATGTGGGGACACGTTGCCAGAAAAACTTTGATGGAGAATAAAGAAGATGAAGATCTTGGATTCTTGAATGCGCAACTCCATAAAGAACCTGAAGTTCTTGAAATCTTGGAGACTGAAAGTCATAAAGAACATCAAGATCTTGGATTCTTGAATGCGCAACTCCATAAAGAACCTGGACTTGTTGAAATCTTGGAGACTGAAAGTCATAAAGAAGATGAAGTTCTTGGATTCTTGAAAGCGCAAAGCTATAAAGAACATGAAGTTGTTGAAATCATGGAGGGTCCTCGGCATGAAAGAAAACGGGAGAGAGAAGATGATAATCCTCCAAAAGAAACAGAGGCAAAACCTAGAAAGATTCTCAAAATGATGGATGTTTCTGGTTTGACAACAGAACATGTTGCAAGTCATTTGCAGAAGTATAGGAATTATTTAAAGAAACCATGTTGTGGAAAAAGGTCAAAGAAAAGTAGATTTGATATTCCAGCTGAATCTGAACATGCTCAATCAATGTTACAACAGCATTCAACTGATGTTACTACTAATTATCATCAAGTTTCCGACATTGGCTACAATAATGAAACAGAAAAGCTTTCAACTGGTTTTGGCGATTATCAAGTCTCCGACATTATGAACGATTTTCCTGATCCATCTGACTTGCTCTTTGATTTAGATGATGAGTTAATATCATTATTATTTTGA 960 0.3563 MTLFFLMKFKKCVIDIIIGCGYFDMMLIDVCMPNMDSYNFVQYVTLQHKIPVIVISSDATESSVLKSIIHGACDYWVQPLHEKQFKTMWGHVARKTLMENKEDEDLGFLNAQLHKEPEVLEILETESHKEHQDLGFLNAQLHKEPGLVEILETESHKEDEVLGFLKAQSYKEHEVVEIMEGPRHERKREREDDNPPKETEAKPRKILKMMDVSGLTTEHVASHLQKYRNYLKKPCCGKRSKKSRFDIPAESEHAQSMLQQHSTDVTTNYHQVSDIGYNNETEKLSTGFGDYQVSDIMNDFPDPSDLLFDLDDELISLLF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4027 319 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 23 280 - -
Psa4g4027 319 Pfam Response regulator receiver domain 23 86 IPR001789 GO:0000160
Psa4g4027 319 Gene3D - 10 102 - -
Psa4g4027 319 SUPERFAMILY CheY-like 22 103 IPR011006 -
Psa4g4027 319 MobiDBLite consensus disorder prediction 179 202 - -
Psa4g4027 319 ProSiteProfiles Response regulatory domain profile. 1 93 IPR001789 GO:0000160
Psa4g4027 319 Gene3D - 152 233 - -
Psa4g4027 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 199 229 IPR006447 GO:0003677
Psa4g4027 319 SUPERFAMILY Homeodomain-like 199 233 IPR009057 -
Psa4g4027 319 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 280 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4027 Psa-Chr4 347673115 347674518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4027 2 235 Response Regulator Gene Family AT3G62670 27.311 2.37e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa4g4027 Response_reg 3.2e-07 CL0304