Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4015 ATGAAGGTGGATGAAGATGAGAATACGGTATCAGTTGAGGCGCCGATTGTATTCGCAAAGGTGTGCAAAATTCTGCATTCTTGGACTCATACTGAAGAGAACAAACGGCGAACACTCCAAAATATTGATATTGCGGCAACCATCCCCAGAACTGATCCTTTTGATTTCCTGGTTGATATTATGCCTCAGGAGGACTTGAGCGATAAAGTGCTCGCATGCATGTTGGAGGGCCTGTTGATGGAAATCCTTACGATAATAAACCTGCAGGATCAAAAGCATCACCACAGTAAAAAATGA 297 0.431 MKVDEDENTVSVEAPIVFAKVCKILHSWTHTEENKRRTLQNIDIAATIPRTDPFDFLVDIMPQEDLSDKVLACMLEGLLMEILTIINLQDQKHHHSKK* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4015 98 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 78 - -
Psa4g4015 98 SUPERFAMILY Histone-fold 1 63 IPR009072 GO:0046982
Psa4g4015 98 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 78 - -
Psa4g4015 98 Gene3D Histone, subunit A 1 63 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4015 Psa-Chr4 344948478 344948846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4015 1 81 CCAAT-HAP5 Transcription Factor Family AT1G08970 57.471 4.19e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4015 K08066 - nnu:104596441 103.605