Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3929 ATGGTGTTATCAGCTTCGCCATGTTCTCTTACCAGAAGCTCCTTGGAAGAGATGTTAGATTCGCTTCGCCGGAAGGATGAAGATGAAGACGAGAAGAAGGACTCACCGCCTGCTTTGCCATCCCGCCCGGCATCCAAGGCTCGCCTCCCGCCGGCGAGGCGGTCCTTGCCCAATAATTTTAAGGTCTGCAACGGTGGTGGTGTGGTGGATAATGGATTTAACGACAATGTGGAAAGTATGAGGAAGGAAACATCAACATGTTTTGAATACAAGGCAAGAGAAAGCAGTTTTGGGAGGAAGAGGGTGAAAATGGATATTGTGGAGTCACCTTATGTGGCAGCTATTTCAGAATTGGATACTGACACTGTTTCTTATTTCATTAAAATGAAGCTTAGTGTTTGGTGTAGGCAACCAAGAGGGCAATGGGAGCTAGGGTCAATGCAGTCAACTTCGGGAGAGGAAGTATATGTTTTACTCTCAAATGGAAAAGTGCTGAATTTGGCTACATCAGAAATTGTACCAGCTAATCCTAATATTTTAGATGGTGTGGACAACCTTATTAAACTCGCTTATTTGAATGAGCCCTCGGTTCTTCACAATCTTAGGTTTAGATATTCTCAGGAGATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCTTTCAAAGATCTCCAGATTTATGGAAATAATTATGTTTTCACTTATAGGCAACAACTTGTTGATAGTCCTCATGTTTATGGCATGATAGATGCAGCTTATAACCAGATGATGAGTGATGAAGTAAATCAGTCCATTGTCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACAGCTAAAATTGCTATACAATACTTAGCTTCTCTTGGCAGTGGCAGTAGCGGGACAACAAATGATGTTCTTCAAACAAATTGTATACTAGAAACTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCAACCAGATTTGGAAAGTTTATGGAAATTCATTTCAGTGCCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTATTTGTTGGAAAAGTCAAGAGTTGTTCAAGTGGCCAATGGTGAGAGGTCGTATCATGTACTATATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGATAGACTAAGTCTTAGAGCAGCCCATGAATATAAATATCTAAACCAGAGTGACTGCATCACTATTGGTGGCATTGACGATGCTATAAACTTTCATCAGCTGATGGAAGCATTTGATGCTGTTCGAATTTGTAAAGAGGACCAAGAGCTGATCTTTAAAGTGCTTGCTGCAATATTATGGTTGGGAAATATATCATTCAAAGTCACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCCCAGGACTTAATGGCAGCATTATCTACCCATAAAGTCCAATCTGACAAAGATACTGTTTCCAAAAGTTTGACATTATTGCAGGCCATTGAAACAAGAGATGCAATTGCCAAATTTATTTATTCAAGCTTGTTTGAATGGCTTGTACAACAACTTAACAAGTCACTTGAAGTGAATGAAAAACATACAGAGAAATCCATTAGTATCCTTGATTTTTATGGGTTTCAGTCATTCCAGAAGAACAACTTTGAACAGTTTTGTATAAATTATGCCAATGAAAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTGTGAATCAGATGGCATCGATTGTACAGCATTAGATTTTGGGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAATCTACTCTCTTTATTGGATGATGAATCAAATTTTGCCGAGGCTTCTGATTTAACATTTGTCAACAGACTGAACCTCCTGGGAACTAATCATTGCTTCAAAGGGGAAAGAGGCAGGGCTTTTAGTGTACGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGTAAAGAACAGAGATAAATTGTCTTCTAATGCTATTCAACTCCTTTCATCATGTAATTGTGAACTGCTGAAGTTGTTCTCCAAAGTGATTAACCAATCCGAGGAGCATGGAAACTCCACTTTCCATGTTGGTGCACTATACTCACAAAAGAGAGGTGTTGGAACAAAGTTCAAGGATCAATTGTTCAAGTTGATGCATCAATTGGAGAGCACCACTCCTCACTTTATTCGCTGCATAAAGCCAAATATTAAGAACCTTCCTGGAATTTATGACAAGGAACTTGTCCTACAACAGCTCAGATGTTGTAGAGTTCTAGAAGCTGTTAAAATTTCGAAGGTTGGATTTCCTACTCGAGTGAACCATCAAGAATTTTCCAGAAGGTACAAGTTTCTGCTTTCTGAGACTGATATACCTCGGGATCCGTTGAGCGTCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTATATCTTCGAGCAGGGCAGATTGGTGCGCTGGAGGATAAGAGAAAACAGTTTTTGCGGGGAATACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCACAGTTATTTCTGTAAACTTAGGAATGGAGTGACAACATTACAATCATTTATGCGAGGAGACATTACAAGAAGGAAACATGGTGTTTTGATGAAATCTTCCATAACAATTTATTCTAAAAAACTTGAGGAGATTCATGCAATCATAATACTTCAATCTGTGATTCGTGGGTGGTTGGTTCGTAGGGATTCTAGTTACATCAATAGACTGAAGAAATATCATGAAAATGAAAAACCTAGACGGAACTCTTGTGTTCAGATGCCAGAAGTTGAGCAGGATTTGTCCAAAGAGCTGCTTCAGAACATGCCTTCAGCTTTAGCAGAATTACAAAAACGCGTGTACAAGGTGGAAGCAATTGTGGAGCAAAAGGAAGAAGAAAATACTGAATTGAGAGAACAACTAAAACAATCTGAGCGAAAGAGGGTTGAATATGAGACAAAGATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGCATCCTTGCAATCGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCATTGTTCAACCTGTAAGACACGATCTTGTGTCGCCTCGCTACTATGATTCTGAAGATGCTTCTTTTATGGGATCTCGAACAACTAGTGGGAGCACACCAATGAAGCTTTCTGGTAGTTTTTCCGTCTCCGATGCCGGGAAGCAGGCTAATGGTACTTTGACAACTGTAAGCAATCTGATGAAGGAATTTGAGCAACGAAGACAAACCTTCAATGATGAAGTTAAAGCTCTGAATGAGATTAAACCAGGGCAGTCTGCCAACACGAGTTCCGCTGATGAACTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACACGAGACAAAAGCAAGGCTTTCCGAATCCGAAAAAAGTCGACGGACATGGTGGGGGAAATTAAGCTCGAGAGCATAA 3555 0.4023 MVLSASPCSLTRSSLEEMLDSLRRKDEDEDEKKDSPPALPSRPASKARLPPARRSLPNNFKVCNGGGVVDNGFNDNVESMRKETSTCFEYKARESSFGRKRVKMDIVESPYVAAISELDTDTVSYFIKMKLSVWCRQPRGQWELGSMQSTSGEEVYVLLSNGKVLNLATSEIVPANPNILDGVDNLIKLAYLNEPSVLHNLRFRYSQEMIYSKAGPILIALNPFKDLQIYGNNYVFTYRQQLVDSPHVYGMIDAAYNQMMSDEVNQSIVISGESGSGKTETAKIAIQYLASLGSGSSGTTNDVLQTNCILETFGNAKTSVNDNSTRFGKFMEIHFSATGKICGAKIQTYLLEKSRVVQVANGERSYHVLYQLCAGSSSSLKDRLSLRAAHEYKYLNQSDCITIGGIDDAINFHQLMEAFDAVRICKEDQELIFKVLAAILWLGNISFKVTDSENHIEVVGDEAVTSAALLMGCSSQDLMAALSTHKVQSDKDTVSKSLTLLQAIETRDAIAKFIYSSLFEWLVQQLNKSLEVNEKHTEKSISILDFYGFQSFQKNNFEQFCINYANERLQQHFNRHLFKLEQEDCESDGIDCTALDFGDNQECLDLFEKKPLNLLSLLDDESNFAEASDLTFVNRLNLLGTNHCFKGERGRAFSVRHYAGEVLYDTNGFLVKNRDKLSSNAIQLLSSCNCELLKLFSKVINQSEEHGNSTFHVGALYSQKRGVGTKFKDQLFKLMHQLESTTPHFIRCIKPNIKNLPGIYDKELVLQQLRCCRVLEAVKISKVGFPTRVNHQEFSRRYKFLLSETDIPRDPLSVSVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLRGILGIQKCFRGHQAHSYFCKLRNGVTTLQSFMRGDITRRKHGVLMKSSITIYSKKLEEIHAIIILQSVIRGWLVRRDSSYINRLKKYHENEKPRRNSCVQMPEVEQDLSKELLQNMPSALAELQKRVYKVEAIVEQKEEENTELREQLKQSERKRVEYETKMKSMEEAWQKQMASLQSSLVAARKSLASENGIVQPVRHDLVSPRYYDSEDASFMGSRTTSGSTPMKLSGSFSVSDAGKQANGTLTTVSNLMKEFEQRRQTFNDEVKALNEIKPGQSANTSSADELRKLKQRFEGWKKQYKVRLHETKARLSESEKSRRTWWGKLSSRA* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3929 1184 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 128 177 IPR004009 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 Coils Coil 1107 1127 - -
Psa4g3929 1184 PRINTS Myosin heavy chain signature 211 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 PRINTS Myosin heavy chain signature 265 290 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 PRINTS Myosin heavy chain signature 308 335 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 Coils Coil 975 1023 - -
Psa4g3929 1184 Gene3D - 364 423 - -
Psa4g3929 1184 Pfam IQ calmodulin-binding motif 915 931 IPR000048 GO:0005515
Psa4g3929 1184 MobiDBLite consensus disorder prediction 1 51 - -
Psa4g3929 1184 MobiDBLite consensus disorder prediction 17 37 - -
Psa4g3929 1184 SMART iq_5 875 897 IPR000048 GO:0005515
Psa4g3929 1184 SMART iq_5 912 934 IPR000048 GO:0005515
Psa4g3929 1184 SMART iq_5 852 874 IPR000048 GO:0005515
Psa4g3929 1184 Coils Coil 1152 1172 - -
Psa4g3929 1184 Gene3D - 784 852 - -
Psa4g3929 1184 SMART MYSc_2a 175 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 Gene3D - 857 902 - -
Psa4g3929 1184 ProSiteProfiles Myosin motor domain profile. 181 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 MobiDBLite consensus disorder prediction 1 16 - -
Psa4g3929 1184 PANTHER MYOSIN-2 ISOFORM X1 109 1183 - -
Psa4g3929 1184 Coils Coil 12 32 - -
Psa4g3929 1184 Gene3D Kinesin motor domain 184 780 IPR036961 -
Psa4g3929 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 932 IPR027417 -
Psa4g3929 1184 Gene3D - 550 741 - -
Psa4g3929 1184 CDD MYSc_Myo8 195 839 IPR036022 -
Psa4g3929 1184 PANTHER MYOSIN 109 1183 - -
Psa4g3929 1184 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Psa4g3929 1184 Pfam Myosin head (motor domain) 183 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa4g3929 1184 Gene3D Myosin VI head, motor domain, U50 subdomain 425 719 - -
Psa4g3929 1184 ProSiteProfiles IQ motif profile. 913 941 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3929 Psa-Chr4 329433008 329463754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3929 1 1179 Myosins gene family AT5G54280 55.664 0.0 1342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3929 K10357 - gmx:100802074 1637.47