Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3905 ATGCCACACCAGTTGGTTCAGATTGTGCCACACCGAGAGTTTCCTGCTGATGTTGTTCTTGGGGATGGTAGAGTTTTCGGCGGTGTTTCTTTGTATTATGGTGATGATTTACCTGATTATAAGCTTCCTTTAGTTTATGCTAGTGATTGTGGTAGTAGATATTGTTACATAGGTTCTTTAGATTCTTCGAAAGTGAAAGGGAGGATTGTTGTTTGTGATCGAGGAGGGAATGCTAGAGTTGAGAAGGGTAGTGCTGTGAAAAGTGCTGGTGGGTTAGGGATGATTATGGCGAATACTGAAGATAGCGGTGAAGAGCTTCTTGCTGATGCACATCTTGTTGCAGCTACAATGGTTTTCACTAGAGAACCAACTAGTTATAATGTTTGCGAAAACAAAAGGAAATTTTCTAGTCCCGGTGATTTGAATTACCCTTCGTTCTCTGTTGTGTTTGATGCAAACAATGAATTGGTTAAGTATAAAAGGGTTGTTACTAATGTTGGTGGTTCTGTTGATGCTGTTTACACTGTCAAAGTGAATGCTCCTTTTGGTGTTGATGTTAGTGTTTCACCTAGCAAGCTTGTTTTCAGTAGTGAAAACAAAACTCAAGCTTTTGAGGTCACATTCGCCAGAATCGGATATGGTGGTTCTCAGAGTTTTGGGTCTTTGGAATGGAGTGATGGAGTTCATATTGTGAGGAGCCCAATTGCTGCTAGATGGAGCAATGGATTCTCATCAGCATCCTTTTGA 747 0.4083 MPHQLVQIVPHREFPADVVLGDGRVFGGVSLYYGDDLPDYKLPLVYASDCGSRYCYIGSLDSSKVKGRIVVCDRGGNARVEKGSAVKSAGGLGMIMANTEDSGEELLADAHLVAATMVFTREPTSYNVCENKRKFSSPGDLNYPSFSVVFDANNELVKYKRVVTNVGGSVDAVYTVKVNAPFGVDVSVSPSKLVFSSENKTQAFEVTFARIGYGGSQSFGSLEWSDGVHIVRSPIAARWSNGFSSASF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3905 248 Pfam PA domain 42 115 IPR003137 -
Psa4g3905 248 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 124 242 IPR045051 -
Psa4g3905 248 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 119 IPR045051 -
Psa4g3905 248 Gene3D - 136 240 - -
Psa4g3905 248 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 11 119 - -
Psa4g3905 248 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 124 242 - -
Psa4g3905 248 CDD PA_subtilisin_like 17 118 - -
Psa4g3905 248 Pfam Fibronectin type-III domain 140 236 IPR041469 -
Psa4g3905 248 SUPERFAMILY PA domain 38 104 IPR046450 -
Psa4g3905 248 Gene3D - 13 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3905 Psa-Chr4 326240884 326244284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3905 117 242 Subtilisin-like Serine Gene Family AT3G14067 52.273 2.26e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3905 - - gmx:100793990 196.823