Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3903 ATGAAGGCGCTGAATGGGCTATTGGGTTTAAGGCGCAGAAAACTTCACGGGGTTTTCAATGGTTTGTGTGCTATGGTTGTTTTCTTCTTTTTTTACAATAGGGAAGATATAATTCGTAATCCGCTTCTTAGACAATCCGCATATTTGGTTAATCATCATGGTTTGCCTCAAAATTCAATTTTGAAGGATGGGGTTTCTGTGATTCACCGTAGAATGGGTGAGATTAGTGCTAACACTTCAAGTGTAGCTGCTGAGAATGATTTGGGTGTGATTAAACCTGGACTGTGTGTTGGATTGCTCCACCACGATGGTTATGATAGCCCTTGTGAATTCTTAAAGGTCAATCCGCAGTGTACTTCTGAAGGATACATTGATTACTTGAGGTTTTTCTTTTGTAAATGTCAAAGTTTCAGGGTTCTTGGTTATCTAGTATTGGGTGTTTGGCTTGCTGCTTTGTTTTATCTCTTGGGTAATACTGCAGCAGATTATTTTTGTCCTTCTCTTGAGCATCTCTCAGAGCTCTTGAAGTTGCCTCCAACTGTGGCTGGTGTTGTTTTGCTTCCACTTGGAAATGGTGCACCCGATGTGTTTGCCAGTATAGCGTCGTTTGTTGGGACTGATACAGGTGAAGTTGGTCTTAACAGTGTATTAGGCGGTGCTCTGTTTGTTACCACTGTTGTTGTTGGAGTTGTTTCTCTTTGTGTTGCAGACAGGAAGGTTCAAATTGATCAACGATGCTTTGTAAGGGACCTGAGTTTCTTTCTGTTCACCCTTTTTATGCTGCTTTTGATTTTGTTTGTTGGTAAGATAGGTATTGGGGCAGCCATTGCCTTTGTATCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAACGAGCTATTGCGGAAACATGCACGGATGCTGAAATTGGATGCTGTGACACCTTTGCTTCCTGTCCAAGGAAGTGTATTCTCTGTTGGTACTGAAGAGGATACGACAATATATAGCTCTTTGCTTGACTTAGACACTGAGAGTGATCCTCCCCGTCTCCCTCCTTCCCTGCCTCAGTGGATGTGGTCTTCAAATGTGGCAATATACTCAAACCAAGCAAATAAAATCAATTTTTCAGATGATGAGAGGCCTCCTTGGGGATGGAGTGATGGATCCACAGAAAACACCAGGTCGTCCTTCTCTGTTTCAAAGCTTTTTTTACTCATGGAGATGCCACTAGCAGTTCCTAGACGGCTAACAATTCCAATGGTTCATGTGGAAGTATGGTCAAAGTTCTTTGCCGTGGCCAGTGCTTCATTGGCTCCCATTCTCCTGGCCTTTTTGTGGAGCACCCAAGATAATGTGAGTAAAACGAGTATTATACTTGCTTATTGTTTTGGCATTTCTGTTGGAAGCACACTTGGTATTCTTGCGTATAAATATACAGTGTCTGATTGTCCACCGTCCCAGTATTTGATTCCGTGGGTTCTCGGAGGATTTGTCATGAGCATAGTTTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTATTAGTAGCTTTTGGTGTAATTTTTGGAATTAATCCATCGATTCTTGGATTAACCGTATTAGCATGGGGAAATTCAATGGGAGATTTAATGTCCAATGTTGCATTGGCATTAGATGGAGATGATGGTGTTCAGATAGCTCTATCTGGATCCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGAATCTCATTGCTGCTTGGCGCGTGGTCAAAGAAACCTTGTTTGTACGTGGTGCCTAAAGACAGTAGCTTATTCTACACAATGGGATTTCTTATCACAGGACTCCTATGGGCACTTGTTGTTTTACCGCGCAACAACATGCATCCTAGCAGAATGTTTGGAATGGGTCTCATCATCCTTTATATGCTTTTTCTTTCTTTCAGAGTATGTACTTCTTTGGGGCTATTAACAATTGCCGGTTTAAGTTAG 1959 0.4181 MKALNGLLGLRRRKLHGVFNGLCAMVVFFFFYNREDIIRNPLLRQSAYLVNHHGLPQNSILKDGVSVIHRRMGEISANTSSVAAENDLGVIKPGLCVGLLHHDGYDSPCEFLKVNPQCTSEGYIDYLRFFFCKCQSFRVLGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSELLKLPPTVAGVVLLPLGNGAPDVFASIASFVGTDTGEVGLNSVLGGALFVTTVVVGVVSLCVADRKVQIDQRCFVRDLSFFLFTLFMLLLILFVGKIGIGAAIAFVSIYVVYAFIVAANELLRKHARMLKLDAVTPLLPVQGSVFSVGTEEDTTIYSSLLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKINFSDDERPPWGWSDGSTENTRSSFSVSKLFLLMEMPLAVPRRLTIPMVHVEVWSKFFAVASASLAPILLAFLWSTQDNVSKTSIILAYCFGISVGSTLGILAYKYTVSDCPPSQYLIPWVLGGFVMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALDGDDGVQIALSGSYAGPMFNTLVGLGISLLLGAWSKKPCLYVVPKDSSLFYTMGFLITGLLWALVVLPRNNMHPSRMFGMGLIILYMLFLSFRVCTSLGLLTIAGLS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3903 652 Pfam Sodium/calcium exchanger protein 487 638 IPR004837 GO:0016021|GO:0055085
Psa4g3903 652 Pfam Sodium/calcium exchanger protein 147 289 IPR004837 GO:0016021|GO:0055085
Psa4g3903 652 Gene3D - 177 320 IPR044880 -
Psa4g3903 652 Gene3D - 417 640 IPR044880 -
Psa4g3903 652 PANTHER CATION/CALCIUM EXCHANGER 4 11 647 - -
Psa4g3903 652 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 11 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3903 Psa-Chr4 326215101 326217926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3903 98 646 Antiporters AT5G17860 41.636 2.87e-131 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3903 K13754 - gmx:100796101 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3903 4 326215101 326217926 Psa4g3903 4 326215101 326217926 ECH