Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3894 ATGACAGCAGATAAAAACCGAAGTATATTGCAGACTGAGGATTTGACCAAGTATATACTTGAAACGAGTGTTTATCCACGAGAAGCAGAAACTCTCAAAGATATAAGGAATGCCAATCAAAGCTACCCTATGGGTTTCATGGGCACTGCACCTGATGCGGGTCAACTAATGGCCATACTCTTGAAGTTGTTGAATGCTAAAAAGACAATTGAAGTCGGAGTTTTTACCGGATACTCTCTTCTCCTGACCGCGCTTTCCATTCCTGATGATGGAAAGATTATAGCCGTGGATCCAGACAGAAAAGCTTATGAAGTAGGGCTTCCATCCATTAAAAAAGCTGGTGTTGAACACAAGATTGATTTCATAGAGTCTGAAGCTTTACCAGTTCTTGATAAACTCTTGGAAAATCCTTCAAATGATGGAAATTTTGACTTTGCTTTTGTGGATGCTGACAAACATAATTATTGGAATTATCATGAGAAGCTTATTAAACTGATTAAGATTGGTGGATTAGTGATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATTGCCGGAAGAAGCAGTTTTAGGGCACAAGAAAAAAATAAGACAGGATGCACTTGCTTTCAATGAAGCAATTGCAAGTGACACTCGTGTTGAGATTTGTGTTGCTTCAATTGGTGATGGTTTCACTATCTGTAGGCGTGCTCATTGA 699 0.3934 MTADKNRSILQTEDLTKYILETSVYPREAETLKDIRNANQSYPMGFMGTAPDAGQLMAILLKLLNAKKTIEVGVFTGYSLLLTALSIPDDGKIIAVDPDRKAYEVGLPSIKKAGVEHKIDFIESEALPVLDKLLENPSNDGNFDFAFVDADKHNYWNYHEKLIKLIKIGGLVIYDNTLWGGTVALPEEAVLGHKKKIRQDALAFNEAIASDTRVEICVASIGDGFTICRRAH* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3894 232 CDD AdoMet_MTases 70 174 - -
Psa4g3894 232 PANTHER O-METHYLTRANSFERASE-RELATED 3 232 - -
Psa4g3894 232 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 3 232 - -
Psa4g3894 232 Pfam O-methyltransferase 21 230 IPR002935 GO:0008171
Psa4g3894 232 Gene3D Vaccinia Virus protein VP39 1 231 IPR029063 -
Psa4g3894 232 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 231 IPR002935 GO:0008171
Psa4g3894 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 230 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3894 Psa-Chr4 325639240 325641192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3894 1 232 Monolignol Biosynthesis Gene Families AT4G26220 61.638 6.70e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3894 K00588 - gmx:100780516 358.992